Os02g0697900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0697900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.23 | 0.598 | 7.16 | -2.1 | 2.1 | 0.609 | -1.34 | -1.41 | -0.429 | 6.53 | 20.69 | 89 | -- | -- |
| 163.04 | 0.595 | 7.17 | -2.12 | 2.08 | 1.11 | -1.38 | -- | -0.433 | 6.53 | 20.49 | 177 | -- | -- |
| 166.62 | 0.601 | 7.16 | -2.11 | 2.09 | 0.477 | -- | -1.7 | -0.426 | 6.5 | 20.89 | 85 | -- | -- |
| 167.97 | 0.604 | 7.17 | -2.14 | 2.07 | 1.13 | -- | -- | -0.431 | 6.52 | 20.25 | 183 | -- | -- |
| 328.74 | 0.844 | 7.11 | -1.45 | -- | 2.26 | -- | -2.37 | -0.049 | -- | 66.75 | 365 | -- | -- |
| 171 | 0.613 | 7.19 | -2.32 | 2.11 | -- | -1.38 | -- | -0.51 | 6.43 | -- | -- | -- | -- |
| 175.72 | 0.621 | 7.19 | -2.34 | 2.1 | -- | -- | -- | -0.505 | 6.43 | -- | -- | -- | -- |
| 332.64 | 0.849 | 7.16 | -1.83 | -- | 2.2 | -- | -- | -0.157 | -- | 40.97 | 367 | -- | -- |
| 273.81 | 0.771 | 7.1 | -- | 1.99 | 2.53 | -- | -- | -0.132 | 6.68 | 20.18 | 220 | -- | -- |
| 405.17 | 0.941 | 7.23 | -2.28 | -- | -- | -- | -- | -0.461 | -- | -- | -- | -- | -- |
| 319.73 | 0.836 | 7.13 | -- | 2.07 | -- | -- | -- | -0.245 | 6.49 | -- | -- | -- | -- |
| 413.17 | 0.947 | 7.09 | -- | -- | 2.71 | -- | -- | 0.176 | -- | 31.62 | 374 | -- | -- |
| 542.74 | 1.09 | 7.17 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.65 | wind | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 2 | 155.48 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 4 | 157.61 | wind | 1.0 | 90 | > th | dose independent | rect. | 21 | 16 |
| 6 | 157.92 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 9 | 157.99 | wind | 3.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 10 | 158.12 | wind | 1.0 | 90 | < th | dose independent | rect. | 1 | 9 |
| 13 | 158.26 | wind | 3.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 14 | 158.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 24 | 158.84 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 17 |
| 29 | 158.97 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 37 | 159.12 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 9 |
| 44 | 159.23 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 2 |
| 46 | 159.24 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 53 | 159.41 | wind | 3.0 | 30 | < th | dose dependent | rect. | 24 | 11 |
| 59 | 159.47 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 9 |
| 61 | 159.51 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 65 | 159.59 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 74 | 159.74 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 76 | 159.77 | wind | 9.0 | 720 | > th | dose independent | rect. | 18 | 16 |
| 77 | 159.77 | wind | 9.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 79 | 159.80 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 10 |
| 86 | 159.87 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 9 |
| 91 | 159.91 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 93 | 159.93 | wind | 9.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 101 | 160.02 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 19 |
| 102 | 160.02 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 111 | 160.10 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 130 | 160.31 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 19 |
| 151 | 160.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 152 | 160.47 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 6 |
| 166 | 160.54 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 14 |
| 179 | 160.62 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 17 |
| 188 | 160.66 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 8 |
| 196 | 160.71 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 198 | 160.72 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 15 |
| 215 | 160.78 | temperature | 20.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 233 | 160.88 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 241 | 160.90 | wind | 9.0 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 244 | 160.92 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 253 | 160.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 283 | 161.09 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 295 | 161.14 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 6 |
| 297 | 161.14 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 311 | 161.19 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 313 | 161.19 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 322 | 161.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 333 | 161.26 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 336 | 161.27 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 338 | 161.28 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 22 |
| 341 | 161.29 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 360 | 161.36 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 364 | 161.36 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 366 | 161.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 9 |
| 368 | 161.38 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 372 | 161.40 | humidity | 60.0 | 90 | > th | dose independent | rect. | 3 | 9 |
| 381 | 161.42 | wind | 1.0 | 90 | > th | dose independent | sin | 6 | NA |
| 383 | 161.42 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 384 | 161.43 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 18 | 18 |
| 390 | 161.45 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 393 | 161.46 | radiation | 20.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 398 | 161.47 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 407 | 161.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 412 | 161.50 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 422 | 161.52 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 7 |
| 433 | 161.54 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 436 | 161.54 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 440 | 161.55 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 17 |
| 442 | 161.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 447 | 161.57 | wind | 7.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 450 | 161.58 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 455 | 161.58 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 16 |
| 456 | 161.58 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 460 | 161.59 | wind | 9.0 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 463 | 161.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 464 | 161.61 | wind | 1.0 | 90 | < th | dose independent | sin | 6 | NA |
| 468 | 161.61 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 6 |
| 475 | 161.63 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 477 | 161.63 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 496 | 161.64 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 501 | 161.65 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 503 | 161.65 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 504 | 161.65 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 505 | 161.65 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 507 | 161.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 16 |
| 514 | 161.66 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 10 |
| 515 | 161.67 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 525 | 161.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 528 | 161.68 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 529 | 161.69 | radiation | 10.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 534 | 161.70 | temperature | 20.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 539 | 161.71 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 542 | 161.73 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 545 | 161.73 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 5 | 17 |
| 560 | 161.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 561 | 161.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 588 | 161.80 | wind | 3.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 594 | 161.81 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 4 | 17 |
| 616 | 161.83 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 618 | 161.84 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 619 | 161.84 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 621 | 161.84 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 625 | 161.84 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 627 | 161.85 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 660 | 161.91 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 668 | 161.93 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 669 | 161.93 | radiation | 20.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 670 | 161.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 672 | 161.93 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 677 | 161.94 | wind | 3.0 | 30 | < th | dose dependent | sin | 5 | NA |
| 680 | 161.95 | temperature | 20.0 | 10 | > th | dose independent | sin | 9 | NA |
| 681 | 161.95 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 690 | 161.96 | temperature | 15.0 | 14400 | > th | dose independent | sin | 18 | NA |
| 696 | 161.97 | radiation | 40.0 | 270 | > th | dose independent | rect. | 8 | 2 |
| 702 | 161.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 718 | 161.97 | wind | 3.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 719 | 161.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 724 | 161.98 | wind | 9.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 730 | 161.99 | wind | 9.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 739 | 161.99 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 23 | 14 |
| 740 | 161.99 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 769 | 162.02 | temperature | 15.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 776 | 162.02 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 778 | 162.03 | temperature | 15.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 800 | 162.05 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 808 | 162.06 | temperature | 20.0 | 10 | > th | dose independent | rect. | 15 | 14 |
| 819 | 162.07 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 18 |
| 842 | 162.09 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 18 | 19 |
| 850 | 162.10 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 858 | 162.11 | atmosphere | 1010.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 866 | 162.11 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 19 | 18 |
| 872 | 162.12 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 873 | 162.12 | wind | 3.0 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 882 | 162.13 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 884 | 162.13 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 20 |
| 905 | 162.14 | wind | 5.0 | 270 | > th | dose independent | rect. | 7 | 2 |
| 922 | 162.15 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 20 |
| 959 | 162.17 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 10 | 20 |
| 965 | 162.18 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 22 |