Os02g0697500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Selenium-binding protein-like.
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Os02g0697500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Selenium-binding protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 176.22 | 0.624 | 10.1 | -1.17 | 2.15 | -1.9 | -0.0485 | 1.02 | -1.02 | 8.98 | 0.76 | 31 | 10.7 | -- |
| 176.85 | 0.619 | 10 | -1.08 | 2.21 | -1.82 | -0.995 | -- | -0.999 | 9.03 | 0.7745 | 31 | 10.7 | -- |
| 176.21 | 0.618 | 10.1 | -1.16 | 2.15 | -1.89 | -- | 1.05 | -1.01 | 8.98 | 0.77 | 31 | 10.7 | -- |
| 180.36 | 0.625 | 10 | -1.15 | 2.15 | -1.9 | -- | -- | -1.02 | 8.97 | 0.78 | 31 | 10.7 | -- |
| 200.35 | 0.659 | 10.1 | -1.14 | -- | -3.76 | -- | 1.64 | -1.16 | -- | 21.86 | 159 | 10.7 | -- |
| 230.2 | 0.711 | 10 | -1.02 | 3.82 | -- | -1.05 | -- | -1 | 9.39 | -- | -- | -- | -- |
| 234.18 | 0.717 | 10 | -1.06 | 3.82 | -- | -- | -- | -1 | 9.39 | -- | -- | -- | -- |
| 199.81 | 0.658 | 10.2 | -1.18 | -- | -3.73 | -- | -- | -1.13 | -- | 30.54 | 215 | 10.9 | -- |
| 214.49 | 0.682 | 10 | -- | 2.14 | -1.87 | -- | -- | -0.929 | 9.01 | 1.5 | 31 | 10.5 | -- |
| 1089.7 | 1.54 | 10.1 | -1.08 | -- | -- | -- | -- | -0.988 | -- | -- | -- | -- | -- |
| 263.87 | 0.76 | 9.97 | -- | 3.82 | -- | -- | -- | -0.884 | 9.41 | -- | -- | -- | -- |
| 228.92 | 0.705 | 10.1 | -- | -- | -3.96 | -- | -- | -1.01 | -- | 37.26 | 255 | 11.2 | -- |
| 1120.63 | 1.56 | 10.1 | -- | -- | -- | -- | -- | -0.868 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 6 |
| 3 | 172.93 | wind | 7.0 | 270 | < th | dose independent | rect. | 10 | 7 |
| 9 | 176.38 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 12 | 176.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 18 |
| 13 | 177.12 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 8 |
| 15 | 177.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 17 |
| 16 | 177.50 | radiation | 1.0 | 30 | < th | dose independent | sin | 17 | NA |
| 17 | 177.63 | radiation | 1.0 | 30 | > th | dose independent | sin | 17 | NA |
| 23 | 178.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 10 |
| 29 | 178.75 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 9 |
| 35 | 179.14 | radiation | 10.0 | 90 | < th | dose dependent | sin | 17 | NA |
| 36 | 179.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 43 | 179.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 17 |
| 44 | 179.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 7 |
| 46 | 179.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 7 |
| 48 | 179.96 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 7 |
| 55 | 180.31 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 7 |
| 59 | 180.55 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 17 |
| 62 | 180.62 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 8 |
| 63 | 180.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 7 |
| 64 | 180.65 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 7 |
| 66 | 180.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 18 |
| 67 | 180.80 | radiation | 1.0 | 10 | < th | dose dependent | sin | 16 | NA |
| 76 | 181.03 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 7 |
| 119 | 182.12 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 6 |
| 125 | 182.31 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 17 |
| 128 | 182.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 17 |
| 129 | 182.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 17 |
| 151 | 182.72 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 163 | 183.05 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 5 |
| 171 | 183.19 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 176 | 183.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 20 |
| 180 | 183.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 15 |
| 183 | 183.41 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 11 | 8 |
| 197 | 183.44 | radiation | 20.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 205 | 183.63 | radiation | 10.0 | 270 | < th | dose independent | rect. | 21 | 9 |
| 222 | 183.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 9 |
| 223 | 183.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 235 | 184.25 | radiation | 1.0 | 90 | > th | dose dependent | sin | 15 | NA |
| 239 | 184.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 18 |
| 244 | 184.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 9 |
| 245 | 184.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 9 |
| 246 | 184.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 9 |
| 249 | 184.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 9 |
| 253 | 184.37 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 15 |
| 257 | 184.44 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 260 | 184.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 17 |
| 263 | 184.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 308 | 185.31 | humidity | 90.0 | 270 | < th | dose independent | rect. | 10 | 6 |
| 322 | 185.39 | radiation | 20.0 | 270 | > th | dose independent | rect. | 11 | 5 |
| 344 | 185.50 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 8 |
| 368 | 185.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 390 | 185.99 | radiation | 40.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 433 | 186.28 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 472 | 186.46 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 16 | 7 |
| 506 | 186.51 | wind | 7.0 | 10 | < th | dose independent | rect. | 12 | 6 |
| 544 | 186.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 15 |
| 545 | 186.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 15 |
| 554 | 187.11 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 560 | 187.20 | radiation | 1.0 | 90 | < th | dose independent | rect. | 16 | 7 |
| 563 | 187.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 4 |
| 574 | 187.32 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 16 |
| 591 | 187.34 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 5 |
| 609 | 187.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 6 |
| 621 | 187.53 | radiation | 1.0 | 30 | < th | dose independent | rect. | 17 | 10 |
| 623 | 187.55 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 628 | 187.58 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 14 | 9 |
| 632 | 187.63 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 5 |
| 665 | 187.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 668 | 187.77 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 15 |
| 670 | 187.81 | temperature | 25.0 | 30 | > th | dose independent | rect. | 14 | 4 |
| 735 | 187.99 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 769 | 188.11 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 789 | 188.35 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 7 |
| 803 | 188.42 | radiation | 1.0 | 270 | > th | dose dependent | sin | 18 | NA |
| 805 | 188.43 | radiation | 40.0 | 270 | > th | dose independent | sin | 15 | NA |
| 813 | 188.47 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 16 | 11 |
| 860 | 188.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 864 | 188.80 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 871 | 188.85 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 875 | 188.87 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 886 | 188.94 | radiation | 20.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 892 | 188.99 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 10 |
| 965 | 189.43 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 17 | 10 |
| 983 | 189.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 17 |
| 984 | 189.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 17 |