Os02g0697200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0697200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.46 | 0.389 | 9.04 | 0.528 | 1.14 | -0.0576 | 0.613 | -5.61 | -0.00557 | 18.6 | 29.6 | 1237 | -- | -- |
| 71.13 | 0.393 | 8.93 | 1.47 | 1.08 | -0.599 | 0.438 | -- | 0.0228 | 18.4 | 28.33 | 1278 | -- | -- |
| 69.39 | 0.388 | 9.04 | 0.522 | 1.14 | -0.06 | -- | -5.58 | -0.00303 | 18.6 | 29.6 | 1246 | -- | -- |
| 70.86 | 0.392 | 8.91 | 1.45 | 1.17 | -0.646 | -- | -- | 0.0787 | 18.6 | 28.3 | 1256 | -- | -- |
| 136.49 | 0.544 | 9.05 | 0.177 | -- | 0.063 | -- | -6.99 | -0.0509 | -- | 29.32 | 1302 | -- | -- |
| 92.69 | 0.451 | 8.89 | 1.33 | 1.18 | -- | 0.658 | -- | 0.14 | 18.3 | -- | -- | -- | -- |
| 93.76 | 0.453 | 8.89 | 1.32 | 1.18 | -- | -- | -- | 0.143 | 18.3 | -- | -- | -- | -- |
| 139.04 | 0.549 | 8.87 | 1.54 | -- | -0.78 | -- | -- | 0.14 | -- | 26.6 | 1308 | -- | -- |
| 128.11 | 0.527 | 8.95 | -- | 1.15 | -0.478 | -- | -- | -0.111 | 18.6 | 30.73 | 1202 | -- | -- |
| 166.25 | 0.602 | 8.87 | 1.29 | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
| 139.58 | 0.553 | 8.93 | -- | 1.16 | -- | -- | -- | -0.00419 | 18.3 | -- | -- | -- | -- |
| 196.1 | 0.652 | 8.93 | -- | -- | -0.515 | -- | -- | -0.14 | -- | 30.6 | 1282 | -- | -- |
| 209.92 | 0.676 | 8.9 | -- | -- | -- | -- | -- | -0.0258 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.79 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 18 |
| 5 | 66.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 11 | 66.62 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 26 | 67.34 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 30 | 67.49 | temperature | 20 | 10 | > th | dose independent | rect. | 14 | 18 |
| 35 | 67.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 6 |
| 47 | 68.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 52 | 68.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 62 | 68.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 74 | 68.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 85 | 69.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 89 | 69.14 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 8 | 20 |
| 98 | 69.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 108 | 69.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 114 | 69.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 124 | 69.45 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 187 | 70.03 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 207 | 70.06 | temperature | 30 | 1440 | > th | dose dependent | sin | 18 | NA |
| 231 | 70.09 | temperature | 25 | 720 | > th | dose dependent | sin | 12 | NA |
| 301 | 70.16 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 390 | 70.16 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 438 | 70.29 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 464 | 70.32 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 496 | 70.40 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 507 | 70.44 | wind | 7 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 508 | 70.45 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 538 | 70.51 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 539 | 70.52 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 542 | 70.52 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 545 | 70.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 549 | 70.56 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 3 |
| 568 | 70.58 | temperature | 30 | 1440 | > th | dose dependent | sin | 10 | NA |
| 580 | 70.60 | temperature | 30 | 1440 | > th | dose independent | sin | 11 | NA |
| 587 | 70.62 | temperature | 10 | 720 | > th | dose dependent | sin | 16 | NA |
| 598 | 70.65 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 611 | 70.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 616 | 70.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 16 |
| 645 | 70.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 647 | 70.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 661 | 70.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 663 | 70.77 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 687 | 70.82 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 755 | 70.88 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 791 | 70.95 | temperature | 25 | 720 | > th | dose independent | rect. | 19 | 3 |
| 829 | 71.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 846 | 71.03 | wind | 7 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 896 | 71.15 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |