Os02g0695700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0695700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.63 | 0.338 | 10.4 | -0.585 | 0.608 | -2.15 | -0.322 | -0.776 | -0.0647 | 23.2 | 26.1 | 1520 | -- | -- |
| 52.12 | 0.336 | 10.4 | -0.733 | 0.629 | -2.03 | -0.287 | -- | -0.0837 | 23.4 | 26.96 | 1608 | -- | -- |
| 52.06 | 0.336 | 10.4 | -0.577 | 0.615 | -2.15 | -- | -0.762 | -0.0628 | 23.3 | 26.1 | 1554 | -- | -- |
| 52.51 | 0.337 | 10.4 | -0.729 | 0.618 | -2.06 | -- | -- | -0.101 | 23.5 | 26.77 | 1610 | -- | -- |
| 59.62 | 0.36 | 10.4 | -0.681 | -- | -2.21 | -- | -0.17 | -0.105 | -- | 27.72 | 960 | -- | -- |
| 113.24 | 0.499 | 10.3 | -0.089 | 0.629 | -- | -0.268 | -- | 0.366 | 23.5 | -- | -- | -- | -- |
| 113.55 | 0.499 | 10.3 | -0.0782 | 0.63 | -- | -- | -- | 0.367 | 23.5 | -- | -- | -- | -- |
| 59.65 | 0.36 | 10.4 | -0.716 | -- | -2.22 | -- | -- | -0.115 | -- | 27.87 | 955 | -- | -- |
| 64.19 | 0.373 | 10.4 | -- | 0.602 | -1.72 | -- | -- | 0.0482 | 23.2 | 26.72 | 1504 | -- | -- |
| 138.5 | 0.55 | 10.3 | -0.0611 | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
| 113.71 | 0.499 | 10.3 | -- | 0.629 | -- | -- | -- | 0.376 | 23.5 | -- | -- | -- | -- |
| 71.42 | 0.394 | 10.4 | -- | -- | -1.91 | -- | -- | 0.0253 | -- | 28.18 | 940 | -- | -- |
| 138.59 | 0.549 | 10.3 | -- | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.00 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 3 | 47.08 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 7 | 47.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 9 | 47.18 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 42 | 47.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 10 |
| 116 | 48.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 136 | 48.09 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 214 | 48.47 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 337 | 48.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 401 | 49.14 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |
| 688 | 50.21 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |