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Os02g0695600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.78 (0.045) R2 : 0.766
β1 : -4.24 (0.167) R2dD : 0.356 R2D : 0.31
β2 : 3.44 (0.127) R2dC : 0.536 R2C : 0.164
β3 : 2.09 (0.128) R2dE : 0.193 R2E : -0.174
β4 : 3.72 (0.52) R2dD*C : 0.0434 R2D*C : 0.00755
β5 : 3.19 (0.584) R2dD*E : 0.0251 R2D*E : -0.0143
γ1 : -0.684 (0.0959) R2dN8 : 0.0351 R2N8 : -0.0128
σ : 0.847
deviance : 324.67
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_____
C
peak time of C : 23.3
E
wheather : humidity
threshold : 44.59
memory length : 208
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.58
open length of G : 9.98

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
324.67 0.847 7.78 -4.24 3.44 2.09 3.72 3.19 -0.684 23.3 44.59 208 1.58 9.98
345.21 0.865 7.79 -4.34 3.35 1.89 2.04 -- -0.7 23.6 43.98 200 1.54 10.2
366.94 0.892 7.82 -4.45 3.32 2.41 -- 1.64 -0.712 22.9 50.63 207 1.28 10
362.08 0.886 7.82 -4.38 3.55 2.29 -- -- -0.727 23.2 42.4 210 1.51 10
697.27 1.24 7.71 -4.34 -- 1.73 -- 1.59 -0.68 -- 73 23 0.624 10.9
381.2 0.915 7.74 -4.31 2.83 -- 2.83 -- -0.721 1.82 -- -- -- --
412.33 0.951 7.75 -4.4 2.83 -- -- -- -0.737 1.77 -- -- -- --
703.87 1.24 7.71 -4.46 -- 1.87 -- -- -0.662 -- 77.59 16 0.341 11.3
881.96 1.38 7.7 -- 3.68 2.29 -- -- -0.223 23.1 39.36 210 1.53 10.4
898.97 1.4 7.72 -4.28 -- -- -- -- -0.673 -- -- -- -- --
922.45 1.42 7.64 -- 2.75 -- -- -- -0.247 1.73 -- -- -- --
1216.67 1.62 7.6 -- -- 1.69 -- -- -0.162 -- 75.85 3 0.884 12
1383.03 1.74 7.61 -- -- -- -- -- -0.198 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 328.30 humidity 50.0 270 > th dose dependent rect. 1 10
2 328.51 humidity 80.0 270 > th dose independent rect. 1 19
3 328.93 humidity 70.0 270 > th dose dependent rect. 1 19
17 331.57 humidity 50.0 90 > th dose dependent rect. 3 9
18 331.67 radiation 1.0 270 > th dose independent rect. 4 11
37 333.11 wind 7.0 270 < th dose independent rect. 6 9
39 333.17 humidity 90.0 270 < th dose independent rect. 7 8
46 333.63 atmosphere 995.0 270 > th dose independent rect. 6 9
50 333.79 precipitation 0.1 270 < th dose independent rect. 6 9
51 333.79 precipitation 0.1 270 < th dose dependent rect. 6 9
56 334.13 humidity 80.0 270 > th dose independent rect. 1 13
57 334.19 humidity 80.0 90 < th dose independent rect. 21 20
63 334.40 temperature 10.0 270 > th dose dependent rect. 15 15
76 335.05 humidity 80.0 270 > th dose independent rect. 1 10
77 335.09 temperature 10.0 270 > th dose independent rect. 6 9
78 335.09 atmosphere 1015.0 270 < th dose independent rect. 6 9
79 335.09 temperature 10.0 270 > th dose independent rect. 15 15
81 335.12 humidity 70.0 270 > th dose dependent rect. 1 13
87 335.28 radiation 40.0 270 < th dose independent rect. 15 15
101 335.59 radiation 30.0 90 < th dose dependent rect. 17 16
116 336.08 wind 9.0 270 < th dose independent rect. 15 15
136 336.76 radiation 30.0 90 < th dose dependent rect. 15 18
145 337.12 atmosphere 1015.0 270 < th dose dependent rect. 15 4
177 338.05 temperature 10.0 90 > th dose dependent rect. 17 14
179 338.05 radiation 10.0 30 < th dose dependent rect. 4 16
193 338.33 precipitation 0.1 270 < th dose independent rect. 19 20
194 338.33 precipitation 0.1 270 < th dose dependent rect. 19 20
203 338.53 precipitation 0.1 270 < th dose independent rect. 18 23
204 338.53 precipitation 0.1 270 < th dose dependent rect. 18 23
208 338.63 radiation 1.0 270 < th dose independent rect. 2 17
211 338.75 radiation 10.0 90 < th dose independent rect. 17 16
215 338.83 radiation 30.0 90 < th dose dependent rect. 13 20
273 339.56 radiation 10.0 30 < th dose independent rect. 3 17
280 339.65 atmosphere 1015.0 270 < th dose dependent rect. 14 6
281 339.68 radiation 1.0 270 < th dose dependent rect. 2 17
315 340.15 humidity 50.0 270 > th dose independent rect. 2 17
318 340.19 radiation 1.0 270 > th dose independent sin 2 NA
319 340.20 humidity 90.0 270 < th dose dependent rect. 19 19
359 340.65 radiation 1.0 270 < th dose dependent sin 1 NA
361 340.70 precipitation 0.1 270 < th dose independent rect. 19 7
362 340.70 precipitation 0.1 270 < th dose dependent rect. 19 7
371 340.73 temperature 10.0 90 > th dose independent rect. 17 14
372 340.73 radiation 40.0 90 < th dose independent rect. 17 14
390 340.88 radiation 1.0 270 < th dose independent sin 2 NA
392 340.89 radiation 40.0 270 < th dose independent rect. 13 7
422 341.17 humidity 70.0 90 > th dose dependent sin 2 NA
437 341.30 humidity 70.0 270 > th dose dependent sin 4 NA
445 341.35 wind 9.0 90 < th dose independent rect. 17 14
464 341.42 wind 1.0 43200 > th dose independent rect. 22 5
474 341.50 atmosphere 995.0 270 > th dose independent rect. 19 20
476 341.52 atmosphere 1015.0 270 < th dose independent rect. 15 15
484 341.59 radiation 10.0 30 < th dose dependent sin 23 NA
492 341.64 humidity 50.0 90 > th dose independent rect. 17 14
511 341.78 wind 7.0 270 < th dose independent rect. 19 20
532 341.95 radiation 10.0 30 < th dose independent rect. 2 21
536 341.96 wind 9.0 270 < th dose dependent rect. 6 9
551 342.04 temperature 20.0 270 > th dose independent rect. 2 18
560 342.08 humidity 60.0 270 > th dose independent rect. 19 7
566 342.10 temperature 10.0 270 > th dose independent rect. 19 7
567 342.10 temperature 30.0 270 < th dose independent rect. 19 7
569 342.10 atmosphere 995.0 270 > th dose independent rect. 19 7
570 342.10 radiation 1.0 270 < th dose independent rect. 19 7
575 342.10 temperature 10.0 270 > th dose independent rect. 2 17
576 342.10 atmosphere 1015.0 270 < th dose independent rect. 2 17
577 342.10 radiation 10.0 270 < th dose dependent rect. 19 7
584 342.12 humidity 80.0 270 > th dose independent sin 4 NA
589 342.14 humidity 80.0 10 < th dose independent rect. 9 8
596 342.19 wind 9.0 270 < th dose independent rect. 19 7
601 342.22 temperature 15.0 270 > th dose dependent rect. 1 6
625 342.41 precipitation 0.1 270 < th dose independent rect. 11 14
626 342.41 precipitation 0.1 270 < th dose dependent rect. 11 14
627 342.42 temperature 10.0 270 > th dose independent rect. 20 5
628 342.42 temperature 30.0 270 < th dose independent rect. 20 5
629 342.42 humidity 50.0 270 > th dose independent rect. 20 5
632 342.42 atmosphere 995.0 270 > th dose independent rect. 20 5
633 342.42 radiation 1.0 270 < th dose independent rect. 20 5
647 342.42 temperature 10.0 270 > th dose independent rect. 1 19
648 342.42 atmosphere 1015.0 270 < th dose independent rect. 1 19
650 342.42 radiation 1.0 270 < th dose dependent rect. 20 5
655 342.43 wind 7.0 270 < th dose independent rect. 20 18
666 342.51 wind 9.0 270 < th dose independent rect. 20 5
686 342.65 radiation 10.0 30 < th dose dependent rect. 4 19
695 342.72 radiation 20.0 90 < th dose dependent rect. 2 21
699 342.74 temperature 10.0 270 > th dose independent rect. 15 4
701 342.74 atmosphere 1010.0 270 < th dose independent rect. 15 4
703 342.74 temperature 10.0 270 > th dose independent rect. 19 20
741 342.87 radiation 40.0 270 < th dose dependent rect. 1 8
754 342.96 radiation 40.0 270 < th dose independent rect. 15 4
758 342.97 precipitation 0.1 270 < th dose independent rect. 9 16
759 342.97 precipitation 0.1 270 < th dose dependent rect. 9 16
802 343.16 wind 1.0 270 > th dose independent rect. 19 7
813 343.22 wind 3.0 14400 < th dose independent rect. 1 2
831 343.31 radiation 10.0 270 < th dose independent rect. 1 8
833 343.32 temperature 10.0 270 > th dose dependent rect. 6 8
847 343.40 wind 3.0 14400 > th dose independent rect. 1 2
860 343.47 radiation 20.0 30 < th dose dependent rect. 13 7
865 343.50 wind 5.0 14400 < th dose dependent rect. 1 1
877 343.59 wind 3.0 14400 > th dose independent rect. 6 1
878 343.59 wind 1.0 43200 < th dose independent rect. 22 2
884 343.63 wind 9.0 270 < th dose independent rect. 15 4
889 343.67 radiation 40.0 270 < th dose independent rect. 1 19
893 343.68 wind 9.0 270 < th dose independent rect. 2 17
897 343.70 wind 3.0 14400 < th dose independent rect. 6 1
902 343.71 radiation 10.0 270 < th dose dependent rect. 2 7
911 343.75 atmosphere 1010.0 270 < th dose independent rect. 14 6
946 343.92 wind 9.0 270 < th dose independent rect. 1 19
950 343.95 temperature 10.0 270 > th dose dependent rect. 15 4
989 344.08 precipitation 0.1 270 < th dose independent rect. 5 22
993 344.08 precipitation 0.1 270 < th dose dependent rect. 5 22
995 344.09 radiation 40.0 270 < th dose dependent rect. 13 6
999 344.11 temperature 10.0 270 > th dose independent rect. 20 18