Os02g0695200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to P-type R2R3 Myb protein (Fragment).
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Os02g0695200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to P-type R2R3 Myb protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 462.86 | 1.01 | 4.19 | -0.551 | 1.09 | 1.58 | -0.519 | -2.94 | 1.47 | 8.3 | 7.804 | 2792 | 5.62 | -- |
| 464.19 | 1 | 4.22 | -0.485 | 1.09 | 2.12 | -0.579 | -- | 1.46 | 8.25 | 7.972 | 2726 | 5.74 | -- |
| 463.66 | 1 | 4.19 | -0.556 | 1.09 | 1.58 | -- | -2.9 | 1.47 | 8.33 | 7.821 | 2801 | 5.81 | -- |
| 465.11 | 1 | 4.21 | -0.488 | 1.09 | 2.12 | -- | -- | 1.47 | 8.31 | 8 | 2729 | 5.82 | -- |
| 529.41 | 1.07 | 4.22 | -0.526 | -- | 1.7 | -- | -2.35 | 1.47 | -- | 7.9 | 2743 | 5.4 | -- |
| 539.4 | 1.09 | 4.27 | -0.903 | 1.11 | -- | -0.581 | -- | 1.22 | 8.07 | -- | -- | -- | -- |
| 540.4 | 1.09 | 4.27 | -0.918 | 1.11 | -- | -- | -- | 1.22 | 8.13 | -- | -- | -- | -- |
| 530.47 | 1.07 | 4.24 | -0.507 | -- | 2.17 | -- | -- | 1.47 | -- | 7.9 | 2699 | 5.32 | -- |
| 470.76 | 1.01 | 4.22 | -- | 1.06 | 2.2 | -- | -- | 1.5 | 8.37 | 8 | 2726 | 6.64 | -- |
| 607.69 | 1.15 | 4.3 | -0.909 | -- | -- | -- | -- | 1.24 | -- | -- | -- | -- | -- |
| 562.62 | 1.11 | 4.25 | -- | 1.1 | -- | -- | -- | 1.32 | 8.19 | -- | -- | -- | -- |
| 536.54 | 1.08 | 4.23 | -- | -- | 2.29 | -- | -- | 1.55 | -- | 7.9 | 2655 | 5.7 | -- |
| 629.49 | 1.17 | 4.27 | -- | -- | -- | -- | -- | 1.34 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 460.62 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 3 | 461.63 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 6 | 462.69 | wind | 7 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 12 | 463.38 | humidity | 90 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 13 | 463.46 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 15 | 463.89 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 16 | 463.96 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 21 | 464.23 | wind | 7 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 32 | 465.49 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 35 | 465.72 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 37 | 465.77 | wind | 9 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 51 | 467.11 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 53 | 467.19 | wind | 3 | 4320 | > th | dose dependent | rect. | 23 | 8 |
| 64 | 467.69 | wind | 5 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 70 | 468.17 | wind | 7 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 82 | 468.48 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 84 | 468.50 | wind | 5 | 4320 | > th | dose independent | rect. | 22 | 9 |
| 87 | 468.67 | wind | 5 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 90 | 468.76 | wind | 3 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 92 | 468.78 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 98 | 468.89 | wind | 5 | 4320 | < th | dose independent | rect. | 24 | 7 |
| 167 | 470.05 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 189 | 470.23 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 192 | 470.25 | wind | 9 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 194 | 470.27 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 230 | 470.51 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 16 |
| 232 | 470.52 | wind | 9 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 238 | 470.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 333 | 471.35 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 351 | 471.47 | wind | 7 | 4320 | > th | dose dependent | sin | 11 | NA |
| 360 | 471.55 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 396 | 471.86 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 406 | 471.92 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 439 | 472.18 | wind | 7 | 4320 | > th | dose independent | sin | 11 | NA |
| 445 | 472.22 | wind | 9 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 488 | 472.53 | wind | 7 | 4320 | < th | dose independent | sin | 11 | NA |
| 530 | 472.83 | wind | 7 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 590 | 473.26 | wind | 7 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 598 | 473.31 | radiation | 1 | 14400 | < th | dose dependent | sin | 10 | NA |
| 808 | 474.48 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 817 | 474.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 899 | 475.14 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 904 | 475.17 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 911 | 475.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 947 | 475.39 | temperature | 20 | 4320 | > th | dose dependent | sin | 1 | NA |
| 973 | 475.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |