Os02g0694800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os02g0694800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.3 | 0.454 | 7.98 | -1.45 | 1 | 0.722 | -0.416 | 0.539 | -0.368 | 21.6 | 0.4092 | 115 | -- | -- |
| 94.14 | 0.452 | 7.99 | -1.5 | 1.02 | 0.708 | 0.0243 | -- | -0.382 | 21.7 | 0.379 | 115 | -- | -- |
| 93.54 | 0.45 | 7.99 | -1.45 | 1.01 | 0.723 | -- | 0.28 | -0.374 | 21.7 | 0.1373 | 118 | -- | -- |
| 93.87 | 0.451 | 7.98 | -1.41 | 1.02 | 0.717 | -- | -- | -0.365 | 21.7 | 0.1199 | 122 | -- | -- |
| 118.73 | 0.507 | 7.96 | -1.35 | -- | 1.26 | -- | 0.236 | -0.354 | -- | 0.5081 | 64 | -- | -- |
| 100.87 | 0.471 | 8.01 | -1.47 | 1.7 | -- | 0.236 | -- | -0.42 | 23.1 | -- | -- | -- | -- |
| 101.11 | 0.471 | 8.01 | -1.48 | 1.7 | -- | -- | -- | -0.42 | 23.1 | -- | -- | -- | -- |
| 118.72 | 0.507 | 7.96 | -1.39 | -- | 1.25 | -- | -- | -0.371 | -- | 0.5135 | 61 | -- | -- |
| 147.93 | 0.566 | 7.96 | -- | 1.08 | 0.734 | -- | -- | -0.348 | 21.3 | 0.03605 | 176 | -- | -- |
| 280.25 | 0.782 | 7.96 | -1.44 | -- | -- | -- | -- | -0.407 | -- | -- | -- | -- | -- |
| 158.52 | 0.589 | 7.97 | -- | 1.68 | -- | -- | -- | -0.256 | 23 | -- | -- | -- | -- |
| 166.25 | 0.601 | 7.93 | -- | -- | 1.26 | -- | -- | -0.201 | -- | 3.728e-06 | 38 | -- | -- |
| 334.69 | 0.854 | 7.93 | -- | -- | -- | -- | -- | -0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.79 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 3 | 88.36 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 4 | 88.46 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 6 | 88.59 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 10 | 88.94 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 6 |
| 19 | 89.23 | temperature | 25.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 21 | 89.30 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 6 |
| 25 | 89.42 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 29 | 89.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 32 | 89.52 | radiation | 1.0 | 90 | < th | dose dependent | sin | 10 | NA |
| 40 | 89.70 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 51 | 89.91 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 58 | 89.98 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 76 | 90.25 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 8 |
| 78 | 90.26 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 105 | 90.42 | temperature | 25.0 | 10 | > th | dose independent | rect. | 10 | 7 |
| 109 | 90.44 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 114 | 90.46 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 118 | 90.47 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 125 | 90.51 | radiation | 10.0 | 270 | < th | dose independent | rect. | 5 | 1 |
| 127 | 90.52 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 143 | 90.59 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 155 | 90.63 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 180 | 90.77 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 187 | 90.82 | wind | 3.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 197 | 90.86 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 203 | 90.87 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 10 | 19 |
| 210 | 90.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 211 | 90.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 213 | 90.91 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 224 | 90.98 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 226 | 90.98 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 243 | 91.05 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 257 | 91.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 258 | 91.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 274 | 91.16 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 22 |
| 281 | 91.19 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 313 | 91.26 | wind | 3.0 | 30 | < th | dose dependent | rect. | 6 | 3 |
| 314 | 91.27 | wind | 3.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 350 | 91.39 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 16 |
| 362 | 91.42 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 16 |
| 364 | 91.44 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 6 | 17 |
| 365 | 91.44 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 4 | 22 |
| 378 | 91.48 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 380 | 91.49 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 390 | 91.54 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 399 | 91.57 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 19 |
| 412 | 91.60 | wind | 7.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 413 | 91.60 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 438 | 91.67 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 447 | 91.70 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 450 | 91.71 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 5 | 1 |
| 453 | 91.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 460 | 91.75 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 461 | 91.76 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 472 | 91.77 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 492 | 91.81 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 18 |
| 495 | 91.82 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 497 | 91.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 21 |
| 506 | 91.83 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 538 | 91.91 | temperature | 25.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 559 | 91.95 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 584 | 92.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 3 |
| 588 | 92.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 589 | 92.01 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 593 | 92.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 641 | 92.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 643 | 92.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 644 | 92.10 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 646 | 92.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 647 | 92.10 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 649 | 92.10 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 10 | 20 |
| 650 | 92.10 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 656 | 92.11 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 658 | 92.11 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 11 |
| 660 | 92.11 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 662 | 92.11 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 11 |
| 677 | 92.14 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 680 | 92.14 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 14 |
| 699 | 92.17 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 750 | 92.27 | humidity | 50.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 752 | 92.27 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 16 |
| 761 | 92.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 768 | 92.32 | temperature | 25.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 773 | 92.33 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 15 |
| 807 | 92.38 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 20 |
| 815 | 92.38 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 822 | 92.40 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 7 |
| 826 | 92.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 21 |
| 831 | 92.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 832 | 92.42 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 22 |
| 835 | 92.43 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 9 |
| 836 | 92.44 | radiation | 30.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 842 | 92.45 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 850 | 92.46 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 859 | 92.48 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 866 | 92.50 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 888 | 92.53 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 9 |
| 892 | 92.53 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 913 | 92.55 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 948 | 92.60 | temperature | 30.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 950 | 92.60 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 5 |
| 962 | 92.62 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 10 | 19 |
| 966 | 92.62 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 976 | 92.65 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 19 |
| 977 | 92.65 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 980 | 92.65 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 19 |
| 984 | 92.66 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 996 | 92.67 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 998 | 92.67 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 9 | 2 |