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Os02g0694400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.06 (0.0269) R2 : 0.181
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.569 (0.0566) R2dN8 : 0.234 R2N8 : 0.181
σ : 0.507
deviance : 117.84
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.08 0.41 7.16 -0.858 0.416 -0.972 0.187 2.22 0.234 3.4 24.4 756 -- --
81.46 0.42 7.12 -0.664 0.404 -1.27 -0.1 -- 0.282 2.73 22.5 2228 -- --
76.17 0.406 7.16 -0.852 0.421 -0.964 -- 2.21 0.238 3.33 24.3 734 -- --
81.44 0.42 7.12 -0.651 0.416 -1.26 -- -- 0.292 2.73 22.48 2232 -- --
84.78 0.429 7.17 -0.905 -- -1.08 -- 2.26 0.201 -- 25.1 958 -- --
103.99 0.478 7.07 -0.163 0.47 -- -0.23 -- 0.541 2.19 -- -- -- --
104.18 0.478 7.07 -0.157 0.471 -- -- -- 0.542 2.32 -- -- -- --
90.89 0.444 7.13 -0.689 -- -1.31 -- -- 0.28 -- 22.39 2382 -- --
89.75 0.441 7.1 -- 0.435 -0.947 -- -- 0.411 2.54 23 2041 -- --
117.34 0.506 7.06 -0.137 -- -- -- -- 0.554 -- -- -- -- --
104.82 0.479 7.06 -- 0.468 -- -- -- 0.56 2.32 -- -- -- --
96.46 0.457 7.09 -- -- -1.19 -- -- 0.409 -- 23.1 887 -- --
117.84 0.507 7.06 -- -- -- -- -- 0.569 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.47 radiation 20.0 43200 > th dose independent rect. 9 1
2 74.84 humidity 60.0 43200 < th dose dependent rect. 13 2
6 75.55 radiation 20.0 43200 < th dose independent rect. 10 1
7 75.62 temperature 25.0 720 < th dose dependent rect. 15 21
16 75.83 temperature 25.0 720 < th dose dependent rect. 24 22
17 75.85 radiation 30.0 43200 < th dose dependent rect. 13 1
25 75.96 humidity 60.0 43200 < th dose dependent rect. 13 21
29 75.99 atmosphere 995.0 43200 < th dose independent rect. 18 20
35 76.03 humidity 90.0 14400 > th dose dependent rect. 15 14
37 76.06 precipitation 0.1 43200 > th dose independent rect. 7 5
40 76.08 radiation 40.0 43200 < th dose dependent rect. 10 1
43 76.09 precipitation 0.1 43200 > th dose dependent rect. 7 5
50 76.16 temperature 25.0 720 < th dose dependent rect. 19 23
63 76.23 humidity 60.0 43200 < th dose dependent rect. 19 22
79 76.31 temperature 25.0 720 < th dose dependent no NA NA
91 76.35 atmosphere 995.0 43200 < th dose dependent rect. 16 18
95 76.37 precipitation 0.1 43200 < th dose independent rect. 7 5
96 76.37 atmosphere 995.0 43200 > th dose independent rect. 19 19
97 76.37 precipitation 0.1 43200 < th dose dependent rect. 7 5
100 76.38 atmosphere 995.0 43200 > th dose independent rect. 21 17
111 76.42 humidity 60.0 43200 < th dose dependent rect. 4 13
118 76.44 precipitation 0.1 43200 < th dose independent rect. 7 3
119 76.44 precipitation 0.1 43200 < th dose dependent rect. 7 3
122 76.45 humidity 70.0 43200 < th dose dependent rect. 17 17
129 76.48 radiation 20.0 43200 > th dose independent rect. 8 6
138 76.52 humidity 80.0 43200 < th dose independent rect. 6 1
149 76.54 atmosphere 995.0 43200 < th dose independent rect. 21 17
159 76.56 radiation 30.0 43200 < th dose dependent rect. 9 5
163 76.57 radiation 40.0 43200 > th dose independent rect. 11 1
170 76.58 humidity 90.0 43200 < th dose dependent rect. 8 3
172 76.58 humidity 60.0 43200 < th dose dependent rect. 12 11
185 76.60 wind 9.0 43200 < th dose independent rect. 10 3
191 76.61 humidity 70.0 43200 > th dose independent rect. 18 2
196 76.61 temperature 25.0 720 < th dose dependent rect. 10 23
209 76.64 atmosphere 995.0 43200 < th dose independent sin 6 NA
217 76.65 humidity 60.0 43200 < th dose dependent no NA NA
221 76.65 humidity 60.0 43200 < th dose dependent rect. 4 19
264 76.69 radiation 20.0 43200 < th dose independent rect. 13 1
265 76.69 wind 7.0 43200 < th dose independent rect. 21 2
306 76.71 temperature 25.0 720 < th dose dependent rect. 6 23
348 76.73 humidity 60.0 43200 < th dose dependent rect. 16 23
363 76.75 wind 7.0 43200 > th dose independent rect. 21 2
381 76.77 humidity 70.0 43200 < th dose dependent rect. 17 19
383 76.78 wind 7.0 43200 > th dose dependent rect. 10 3
401 76.81 humidity 60.0 43200 < th dose dependent sin 23 NA
417 76.82 temperature 20.0 14400 < th dose independent rect. 20 5
424 76.83 humidity 70.0 43200 < th dose dependent sin 7 NA
449 76.86 temperature 20.0 14400 < th dose independent rect. 20 2
464 76.86 atmosphere 995.0 43200 < th dose dependent sin 9 NA
477 76.87 humidity 70.0 43200 < th dose dependent rect. 21 15
503 76.92 wind 9.0 43200 > th dose independent rect. 10 3
509 76.92 atmosphere 995.0 43200 < th dose dependent rect. 21 13
532 76.95 humidity 70.0 43200 < th dose dependent rect. 4 8
536 76.96 radiation 1.0 14400 < th dose independent rect. 7 1
537 76.96 temperature 20.0 14400 > th dose independent rect. 20 5
551 76.97 atmosphere 995.0 43200 < th dose dependent rect. 10 20
581 77.01 humidity 70.0 43200 < th dose independent rect. 3 9
591 77.02 humidity 70.0 43200 > th dose independent rect. 4 8
625 77.04 humidity 70.0 43200 < th dose independent rect. 18 15
627 77.04 humidity 90.0 14400 > th dose dependent rect. 5 1
639 77.05 radiation 1.0 14400 > th dose independent rect. 7 1
640 77.05 humidity 70.0 43200 < th dose independent rect. 17 6
642 77.05 humidity 90.0 14400 > th dose dependent sin 13 NA
662 77.06 humidity 70.0 43200 < th dose independent rect. 17 18
663 77.06 wind 7.0 43200 > th dose dependent rect. 21 2
666 77.06 humidity 90.0 14400 > th dose dependent rect. 2 9
792 77.13 humidity 70.0 43200 < th dose independent rect. 18 2
832 77.15 atmosphere 995.0 43200 < th dose independent rect. 1 11
834 77.15 humidity 50.0 43200 > th dose independent rect. 14 19
841 77.16 radiation 20.0 43200 > th dose independent sin 7 NA
842 77.16 humidity 70.0 43200 > th dose independent rect. 10 1
892 77.20 atmosphere 995.0 43200 < th dose independent rect. 2 9
914 77.22 humidity 70.0 43200 < th dose independent sin 4 NA
918 77.22 humidity 70.0 43200 < th dose independent rect. 23 20
936 77.24 atmosphere 995.0 43200 > th dose independent sin 7 NA
958 77.25 humidity 90.0 14400 > th dose dependent rect. 18 16
974 77.27 humidity 70.0 43200 > th dose independent rect. 1 19
986 77.28 atmosphere 995.0 43200 < th dose independent rect. 5 3
987 77.28 humidity 70.0 43200 > th dose independent rect. 17 5
988 77.28 atmosphere 995.0 43200 < th dose independent rect. 4 5
989 77.28 atmosphere 995.0 43200 < th dose independent rect. 3 7
994 77.28 atmosphere 995.0 43200 < th dose dependent rect. 2 7
999 77.29 humidity 80.0 43200 > th dose independent rect. 6 1