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Os02g0693500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0282) R2 : 0.76
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.79 (0.0737) R2dC : 0.756 R2C : 0.745
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.279 (0.0593) R2dN8 : 0.0151 R2N8 : 0.00444
σ : 0.531
deviance : 129.05
__
_____
C
peak time of C : 5.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.4 0.475 13.4 -0.538 2.98 -0.888 0.714 2.81 -0.434 5.33 93.55 72 -- --
108.52 0.485 13.4 -0.542 3.01 -0.778 1.58 -- -0.419 5.31 93.49 79 -- --
103.35 0.473 13.4 -0.545 2.97 -0.853 -- 3.3 -0.436 5.33 93.53 74 -- --
112.03 0.493 13.4 -0.557 2.94 -1.22 -- -- -0.389 5.41 94.5 219 -- --
272.03 0.768 13.3 -0.437 -- 2.54 -- 0.886 0.0769 -- 66.13 367 -- --
116.17 0.505 13.4 -0.592 2.79 -- 1.23 -- -0.34 5.38 -- -- -- --
119.9 0.513 13.4 -0.589 2.8 -- -- -- -0.345 5.4 -- -- -- --
269.76 0.765 13.3 -0.572 -- 2.56 -- -- -0.0808 -- 65 374 -- --
120.23 0.511 13.4 -- 3.02 -1.14 -- -- -0.382 5.43 93.81 224 -- --
527.72 1.07 13.4 -0.495 -- -- -- -- -0.276 -- -- -- -- --
129.05 0.531 13.4 -- 2.79 -- -- -- -0.279 5.4 -- -- -- --
278.87 0.778 13.4 -- -- 2.54 -- -- -0.0608 -- 64.66 371 -- --
534.17 1.08 13.4 -- -- -- -- -- -0.221 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.72 temperature 20.0 270 > th dose independent rect. 12 3
2 91.00 wind 1.0 90 < th dose dependent rect. 24 1
3 91.38 temperature 20.0 90 > th dose independent rect. 12 5
4 91.40 radiation 1.0 1440 > th dose independent rect. 12 1
7 91.77 radiation 1.0 1440 > th dose independent rect. 9 4
8 91.81 precipitation 0.1 270 < th dose independent rect. 12 3
9 91.81 precipitation 0.1 270 < th dose dependent rect. 12 3
10 91.84 atmosphere 1010.0 270 < th dose independent rect. 12 3
11 91.98 temperature 10.0 270 > th dose independent rect. 12 3
14 91.98 temperature 10.0 270 > th dose independent rect. 15 21
15 91.99 wind 9.0 270 < th dose independent rect. 15 21
16 92.07 temperature 10.0 270 > th dose dependent rect. 12 3
17 92.08 wind 9.0 270 < th dose independent rect. 12 3
18 92.11 atmosphere 995.0 270 > th dose independent rect. 12 3
20 92.16 precipitation 0.1 270 < th dose independent rect. 15 21
21 92.16 precipitation 0.1 270 < th dose dependent rect. 15 21
23 92.19 humidity 90.0 270 < th dose independent rect. 12 3
24 92.31 wind 1.0 90 > th dose dependent rect. 12 5
25 92.34 wind 1.0 270 > th dose dependent rect. 12 3
26 92.43 humidity 50.0 270 > th dose independent rect. 12 3
28 92.60 wind 1.0 270 > th dose independent rect. 12 3
31 92.72 wind 1.0 90 < th dose independent rect. 24 1
40 93.54 temperature 20.0 30 > th dose independent rect. 12 16
42 93.56 precipitation 0.1 90 < th dose independent rect. 12 5
43 93.56 precipitation 0.1 90 < th dose dependent rect. 12 5
45 93.61 wind 3.0 90 > th dose independent rect. 12 5
46 93.62 atmosphere 1010.0 90 < th dose independent rect. 12 5
47 93.64 temperature 10.0 90 > th dose independent rect. 12 5
50 93.64 temperature 10.0 90 > th dose independent rect. 17 19
53 93.70 humidity 90.0 90 < th dose independent rect. 12 5
55 93.80 wind 9.0 90 < th dose independent rect. 12 5
58 93.86 precipitation 0.1 270 < th dose independent rect. 2 10
59 93.86 precipitation 0.1 270 < th dose dependent rect. 2 10
61 93.87 wind 9.0 90 < th dose independent rect. 17 19
62 93.87 precipitation 0.1 90 < th dose independent rect. 17 19
63 93.87 precipitation 0.1 90 < th dose dependent rect. 17 19
66 93.94 atmosphere 995.0 90 > th dose independent rect. 17 19
81 94.19 radiation 1.0 270 > th dose independent rect. 12 3
88 94.36 humidity 50.0 90 > th dose independent rect. 17 19
96 94.50 temperature 10.0 270 > th dose independent rect. 2 10
97 94.50 atmosphere 995.0 270 > th dose independent rect. 2 10
98 94.50 atmosphere 1015.0 270 < th dose independent rect. 2 10
99 94.50 temperature 10.0 270 > th dose independent rect. 12 14
102 94.60 atmosphere 995.0 270 > th dose dependent rect. 12 3
108 94.80 atmosphere 995.0 90 > th dose independent rect. 12 5
114 94.86 wind 9.0 270 < th dose independent rect. 2 10
144 95.26 radiation 1.0 1440 < th dose independent rect. 9 4
145 95.26 radiation 1.0 1440 < th dose dependent rect. 9 4
150 95.36 atmosphere 995.0 90 > th dose dependent rect. 12 5
153 95.38 radiation 40.0 270 < th dose independent rect. 16 19
161 95.54 wind 9.0 270 < th dose independent rect. 12 14
163 95.55 radiation 40.0 270 < th dose independent rect. 15 21
165 95.57 atmosphere 995.0 270 > th dose independent rect. 15 21
167 95.61 temperature 30.0 30 < th dose independent rect. 18 18
171 95.68 radiation 1.0 1440 < th dose independent rect. 12 1
174 95.68 radiation 1.0 1440 < th dose dependent rect. 12 1
183 95.69 wind 1.0 270 > th dose independent rect. 15 21
215 95.84 humidity 50.0 270 > th dose independent rect. 2 10
305 96.45 precipitation 0.1 270 < th dose independent rect. 12 14
306 96.45 precipitation 0.1 270 < th dose dependent rect. 12 14
322 96.54 temperature 10.0 1440 > th dose independent rect. 13 6
326 96.54 temperature 10.0 1440 > th dose independent rect. 19 18
329 96.54 atmosphere 995.0 1440 > th dose independent rect. 19 18
339 96.59 temperature 10.0 90 > th dose dependent rect. 12 14
342 96.65 wind 1.0 90 > th dose independent rect. 17 19
381 96.86 humidity 50.0 270 > th dose dependent rect. 20 11
405 97.03 radiation 1.0 270 > th dose dependent rect. 12 3
410 97.05 radiation 40.0 90 < th dose dependent sin 14 NA
431 97.13 radiation 40.0 30 < th dose independent rect. 13 5
471 97.38 radiation 10.0 90 > th dose dependent sin 13 NA
475 97.41 radiation 40.0 270 < th dose dependent rect. 16 19
481 97.43 radiation 20.0 1440 < th dose dependent rect. 11 2
529 97.83 radiation 1.0 1440 > th dose independent rect. 9 1
565 98.01 atmosphere 1015.0 90 < th dose independent rect. 17 19
581 98.09 atmosphere 995.0 270 > th dose independent rect. 12 14
584 98.12 temperature 20.0 30 > th dose independent rect. 12 18
620 98.27 radiation 20.0 1440 < th dose independent rect. 11 2
633 98.30 wind 9.0 270 < th dose dependent rect. 12 3
659 98.44 humidity 90.0 10 < th dose independent rect. 18 18
672 98.49 radiation 40.0 270 > th dose independent rect. 12 22
697 98.60 temperature 10.0 270 > th dose independent rect. 21 10
698 98.60 temperature 30.0 270 < th dose independent rect. 21 10
699 98.60 humidity 50.0 270 > th dose independent rect. 21 10
701 98.60 atmosphere 995.0 270 > th dose independent rect. 21 10
702 98.60 radiation 40.0 270 < th dose independent rect. 21 10
703 98.60 temperature 10.0 270 > th dose independent rect. 7 14
718 98.64 radiation 1.0 90 > th dose dependent rect. 13 5
764 98.75 wind 9.0 270 < th dose independent rect. 21 10
770 98.76 humidity 90.0 270 > th dose dependent rect. 22 4
798 98.80 atmosphere 1015.0 270 < th dose dependent rect. 12 3
829 98.83 radiation 40.0 270 < th dose dependent rect. 21 10
909 99.05 wind 9.0 270 < th dose independent rect. 7 14
914 99.08 precipitation 0.1 270 < th dose independent rect. 7 14
916 99.08 precipitation 0.1 270 < th dose dependent rect. 7 14
934 99.11 radiation 1.0 90 > th dose dependent rect. 13 20
975 99.22 radiation 40.0 270 < th dose independent rect. 7 14