Os02g0690800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M20 family protein.
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Os02g0690800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M20 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.4 | 0.276 | 8.17 | -0.472 | 0.719 | 2.19 | 0.418 | -0.399 | -0.339 | 11.1 | 9.995 | 271 | -- | -- |
| 34.46 | 0.273 | 8.16 | -0.411 | 0.654 | 2.2 | 0.359 | -- | -0.324 | 11.1 | 9.853 | 223 | -- | -- |
| 34.99 | 0.276 | 8.16 | -0.417 | 0.634 | 2.22 | -- | -0.115 | -0.326 | 11.1 | 9.324 | 213 | -- | -- |
| 35 | 0.276 | 8.16 | -0.399 | 0.618 | 2.23 | -- | -- | -0.322 | 11.2 | 9.339 | 201 | -- | -- |
| 41.58 | 0.302 | 8.19 | -0.426 | -- | 2.68 | -- | 0.218 | -0.384 | -- | 9.324 | 213 | -- | -- |
| 84.42 | 0.431 | 8.1 | 0.0566 | 1 | -- | 0.547 | -- | -0.0131 | 13.7 | -- | -- | -- | -- |
| 85.6 | 0.433 | 8.1 | 0.0742 | 1 | -- | -- | -- | -0.00998 | 13.7 | -- | -- | -- | -- |
| 41.6 | 0.3 | 8.19 | -0.462 | -- | 2.71 | -- | -- | -0.397 | -- | 8.09 | 10 | -- | -- |
| 38.59 | 0.291 | 8.16 | -- | 0.425 | 2.1 | -- | -- | -0.269 | 12.8 | 10.1 | 224 | -- | -- |
| 146.71 | 0.566 | 8.11 | 0.0336 | -- | -- | -- | -- | -0.0323 | -- | -- | -- | -- | -- |
| 85.75 | 0.433 | 8.1 | -- | 1 | -- | -- | -- | -0.0182 | 13.7 | -- | -- | -- | -- |
| 46.81 | 0.32 | 8.18 | -- | -- | 2.54 | -- | -- | -0.326 | -- | 10.1 | 224 | -- | -- |
| 146.74 | 0.565 | 8.11 | -- | -- | -- | -- | -- | -0.036 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 4 | 32.59 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 17 | 34.08 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 21 | 34.40 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 22 | 34.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 28 | 34.89 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 40 | 35.32 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 41 | 35.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 43 | 35.42 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 45 | 35.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 51 | 35.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 52 | 35.61 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 56 | 35.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 60 | 35.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 69 | 35.97 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 70 | 35.98 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 110 | 36.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 117 | 36.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 161 | 37.59 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 20 |
| 186 | 37.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 210 | 38.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 233 | 38.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 270 | 38.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 299 | 38.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 319 | 39.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 328 | 39.06 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 446 | 39.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 560 | 40.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 567 | 40.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 581 | 40.37 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 697 | 40.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 835 | 41.58 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 991 | 42.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |