Os02g0690200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0690200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.77 | 0.381 | 8.64 | 1.5 | 0.63 | 1.5 | -0.817 | 0.149 | 0.519 | 6.07 | 29.07 | 42 | -- | -- |
| 65.57 | 0.377 | 8.63 | 1.53 | 0.627 | 1.51 | -0.781 | -- | 0.527 | 6.04 | 28.97 | 53 | -- | -- |
| 67.05 | 0.381 | 8.63 | 1.53 | 0.623 | 1.51 | -- | -0.0306 | 0.537 | 6.16 | 28.75 | 55 | -- | -- |
| 67.03 | 0.381 | 8.63 | 1.53 | 0.618 | 1.51 | -- | -- | 0.536 | 6.12 | 28.76 | 59 | -- | -- |
| 82.77 | 0.424 | 8.63 | 1.65 | -- | 1.89 | -- | -0.128 | 0.591 | -- | 30.27 | 111 | -- | -- |
| 97.41 | 0.463 | 8.7 | 1.15 | 0.992 | -- | -0.565 | -- | 0.219 | 4.61 | -- | -- | -- | -- |
| 98.26 | 0.464 | 8.7 | 1.15 | 0.988 | -- | -- | -- | 0.221 | 4.59 | -- | -- | -- | -- |
| 82.75 | 0.424 | 8.63 | 1.62 | -- | 1.88 | -- | -- | 0.591 | -- | 30.07 | 111 | -- | -- |
| 121.6 | 0.516 | 8.69 | -- | 0.804 | 0.859 | -- | -- | 0.246 | 5.36 | 28.76 | 59 | -- | -- |
| 150.21 | 0.573 | 8.71 | 1.19 | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
| 133.16 | 0.54 | 8.73 | -- | 1.01 | -- | -- | -- | 0.0933 | 4.56 | -- | -- | -- | -- |
| 147.47 | 0.566 | 8.69 | -- | -- | 1.43 | -- | -- | 0.317 | -- | 31.23 | 70 | -- | -- |
| 187.49 | 0.639 | 8.74 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.06 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 6 | 56.80 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 25 | 59.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 40 | 61.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 42 | 61.21 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 50 | 61.75 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 82 | 63.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 85 | 63.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 147 | 65.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 182 | 65.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 202 | 66.24 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 211 | 66.39 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 213 | 66.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 241 | 66.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 252 | 67.16 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 256 | 67.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 261 | 67.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 282 | 67.62 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 283 | 67.65 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 288 | 67.71 | humidity | 60 | 30 | > th | dose dependent | rect. | 5 | 15 |
| 357 | 68.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 403 | 69.15 | temperature | 20 | 10 | > th | dose independent | rect. | 8 | 21 |
| 440 | 69.46 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 450 | 69.53 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 21 |
| 481 | 69.80 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 577 | 70.59 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 19 |
| 648 | 71.25 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 652 | 71.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 680 | 71.50 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 23 |
| 688 | 71.56 | humidity | 60 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 699 | 71.65 | temperature | 15 | 90 | > th | dose dependent | sin | 8 | NA |
| 702 | 71.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 705 | 71.69 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 15 |
| 707 | 71.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 737 | 71.89 | humidity | 60 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 743 | 71.92 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 752 | 71.97 | radiation | 1 | 270 | < th | dose independent | rect. | 4 | 14 |
| 799 | 72.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 807 | 72.36 | temperature | 20 | 30 | > th | dose dependent | rect. | 2 | 23 |
| 808 | 72.39 | temperature | 15 | 90 | > th | dose dependent | rect. | 22 | 23 |
| 819 | 72.46 | radiation | 1 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 880 | 72.86 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 904 | 72.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 976 | 73.37 | humidity | 90 | 10 | < th | dose dependent | rect. | 8 | 17 |
| 978 | 73.38 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 19 |
| 982 | 73.40 | humidity | 70 | 10 | > th | dose independent | rect. | 5 | 19 |