Os02g0684300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0684300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.08 | 0.322 | 9.85 | 1.16 | 1.08 | 0.025 | 0.377 | -4.74 | 0.365 | 18.1 | 29.64 | 1159 | -- | -- |
| 49.17 | 0.327 | 9.75 | 1.96 | 1.03 | -0.434 | 0.18 | -- | 0.405 | 17.8 | 31.53 | 1167 | -- | -- |
| 47.4 | 0.321 | 9.85 | 1.17 | 1.08 | 0.0256 | -- | -4.72 | 0.372 | 18.1 | 29.93 | 1165 | -- | -- |
| 48.55 | 0.325 | 9.76 | 1.94 | 1.08 | -0.495 | -- | -- | 0.382 | 18.1 | 31.14 | 1171 | -- | -- |
| 106.59 | 0.481 | 9.86 | 0.895 | -- | 0.1 | -- | -5.75 | 0.308 | -- | 29.67 | 1265 | -- | -- |
| 59.86 | 0.363 | 9.73 | 1.82 | 1.1 | -- | 0.48 | -- | 0.47 | 17.9 | -- | -- | -- | -- |
| 60.42 | 0.364 | 9.73 | 1.82 | 1.11 | -- | -- | -- | 0.471 | 17.9 | -- | -- | -- | -- |
| 109.09 | 0.486 | 9.74 | 1.93 | -- | -0.546 | -- | -- | 0.344 | -- | 31.1 | 1237 | -- | -- |
| 144.42 | 0.56 | 9.79 | -- | 1.08 | -0.285 | -- | -- | 0.233 | 18.1 | 34.49 | 1133 | -- | -- |
| 123.95 | 0.52 | 9.72 | 1.79 | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
| 147.8 | 0.569 | 9.78 | -- | 1.08 | -- | -- | -- | 0.269 | 18 | -- | -- | -- | -- |
| 186.51 | 0.636 | 9.77 | -- | -- | 0.834 | -- | -- | 0.184 | -- | 24.28 | 259 | -- | -- |
| 208.23 | 0.674 | 9.76 | -- | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.87 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 2 | 45.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 12 |
| 9 | 45.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 11 |
| 10 | 45.47 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 11 | 45.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 47 | 46.10 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 66 | 46.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 11 |
| 69 | 46.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 102 | 46.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 108 | 46.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 121 | 46.73 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 208 | 47.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 246 | 47.28 | temperature | 25 | 720 | > th | dose dependent | sin | 14 | NA |
| 251 | 47.33 | temperature | 10 | 10 | > th | dose dependent | sin | 13 | NA |
| 305 | 47.48 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 335 | 47.57 | temperature | 30 | 10 | < th | dose dependent | sin | 14 | NA |
| 336 | 47.57 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 377 | 47.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 399 | 47.72 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 482 | 47.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 492 | 47.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 518 | 48.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 544 | 48.05 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 20 | 8 |
| 597 | 48.12 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 660 | 48.20 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 20 | 8 |
| 802 | 48.38 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 13 |