Os02g0684100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sulfotransferase family protein.
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Os02g0684100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sulfotransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.73 | 0.563 | 3.1 | 0.21 | 0.545 | -0.768 | 1.58 | -1.63 | 0.0224 | 16.2 | 20.27 | 109 | -- | -- |
| 144.59 | 0.56 | 3.08 | 0.462 | 0.559 | -0.79 | 1.41 | -- | 0.0805 | 17.1 | 21.8 | 376 | -- | -- |
| 148.58 | 0.568 | 3.07 | 0.487 | 0.558 | -0.803 | -- | -0.121 | 0.101 | 16.2 | 20.92 | 138 | -- | -- |
| 148.31 | 0.567 | 3.07 | 0.499 | 0.557 | -0.773 | -- | -- | 0.102 | 17.2 | 21.7 | 395 | -- | -- |
| 159.49 | 0.588 | 3.09 | 0.306 | -- | -0.306 | -- | -0.45 | -0.00893 | -- | 20.8 | 123 | -- | -- |
| 156.93 | 0.587 | 3.1 | 0.325 | 0.238 | -- | 0.976 | -- | -0.0358 | 17.1 | -- | -- | -- | -- |
| 159.29 | 0.591 | 3.1 | 0.326 | 0.244 | -- | -- | -- | -0.031 | 16.7 | -- | -- | -- | -- |
| 152.54 | 0.575 | 3.07 | 0.512 | -- | -0.559 | -- | -- | 0.0897 | -- | 20.7 | 1253 | -- | -- |
| 154.36 | 0.579 | 3.09 | -- | 0.488 | -0.622 | -- | -- | 0.0191 | 17.3 | 21.98 | 416 | -- | -- |
| 162.46 | 0.596 | 3.09 | 0.317 | -- | -- | -- | -- | -0.0373 | -- | -- | -- | -- | -- |
| 162.09 | 0.596 | 3.1 | -- | 0.238 | -- | -- | -- | -0.0673 | 16.7 | -- | -- | -- | -- |
| 158.72 | 0.587 | 3.09 | -- | -- | -0.418 | -- | -- | 0.00506 | -- | 21.5 | 1217 | -- | -- |
| 165.1 | 0.6 | 3.1 | -- | -- | -- | -- | -- | -0.0725 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 18 |
| 15 | 139.59 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 8 |
| 17 | 139.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 11 |
| 32 | 140.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 40 | 140.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 19 |
| 69 | 141.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 8 |
| 74 | 141.42 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 75 | 141.44 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 78 | 141.51 | temperature | 30 | 270 | < th | dose dependent | sin | 19 | NA |
| 84 | 141.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 95 | 141.76 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 101 | 141.83 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 10 |
| 103 | 141.88 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 17 |
| 106 | 141.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 13 |
| 138 | 142.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 19 |
| 144 | 142.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 155 | 142.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 13 |
| 162 | 142.32 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 10 |
| 174 | 142.38 | temperature | 30 | 720 | < th | dose dependent | sin | 23 | NA |
| 198 | 142.47 | temperature | 25 | 720 | < th | dose independent | sin | 23 | NA |
| 208 | 142.52 | temperature | 25 | 720 | > th | dose independent | sin | 0 | NA |
| 210 | 142.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 15 |
| 219 | 142.55 | temperature | 25 | 270 | < th | dose independent | sin | 19 | NA |
| 226 | 142.57 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 15 |
| 232 | 142.60 | temperature | 25 | 720 | < th | dose independent | rect. | 2 | 19 |
| 235 | 142.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 12 |
| 261 | 142.73 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 11 |
| 269 | 142.75 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 9 |
| 272 | 142.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 282 | 142.79 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 14 |
| 354 | 142.99 | temperature | 25 | 270 | > th | dose independent | sin | 19 | NA |
| 363 | 143.00 | temperature | 20 | 720 | > th | dose dependent | sin | 0 | NA |
| 385 | 143.07 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 4 |
| 388 | 143.07 | temperature | 25 | 270 | > th | dose independent | rect. | 12 | 21 |
| 421 | 143.15 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 4 |
| 424 | 143.15 | temperature | 10 | 720 | > th | dose dependent | sin | 0 | NA |
| 429 | 143.17 | temperature | 20 | 270 | > th | dose dependent | sin | 19 | NA |
| 432 | 143.18 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 2 |
| 523 | 143.37 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 2 |
| 564 | 143.44 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 8 |
| 622 | 143.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 639 | 143.58 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 14 |
| 679 | 143.67 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 691 | 143.70 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 716 | 143.74 | temperature | 20 | 10 | > th | dose dependent | sin | 15 | NA |
| 731 | 143.77 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 739 | 143.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 19 |
| 784 | 143.88 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 788 | 143.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 22 |
| 930 | 144.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 968 | 144.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |