Os02g0683800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0683800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 448.76 | 0.995 | 6.72 | -6.2 | 2.08 | -2.85 | -3.27 | 0.95 | -1.87 | 23.1 | 20.11 | 1355 | 3.18 | 6.02 |
| 446.56 | 0.984 | 6.71 | -5.99 | 2.04 | -2.99 | -3.32 | -- | -1.85 | 23.2 | 20.3 | 1352 | 3.4 | 6.1 |
| 490.07 | 1.03 | 6.72 | -6.06 | 2.09 | -2.92 | -- | 0.823 | -1.86 | 22.8 | 20.38 | 1338 | 3.23 | 6.27 |
| 491.22 | 1.03 | 6.68 | -5.83 | 2.1 | -3.02 | -- | -- | -1.8 | 22.8 | 20.36 | 1338 | 3.3 | 6.4 |
| 663.28 | 1.2 | 6.64 | -5.76 | -- | -4.02 | -- | 1.73 | -1.68 | -- | 20.32 | 750 | 3.17 | 6.55 |
| 745.59 | 1.28 | 6.5 | -4.7 | 2.13 | -- | -3.13 | -- | -0.993 | 23.5 | -- | -- | -- | -- |
| 786.33 | 1.31 | 6.5 | -4.56 | 2.15 | -- | -- | -- | -0.977 | 23.2 | -- | -- | -- | -- |
| 670.46 | 1.21 | 6.6 | -5.6 | -- | -4.69 | -- | -- | -1.62 | -- | 20.8 | 721 | 4.4 | 6.5 |
| 1239.68 | 1.64 | 6.22 | -- | 2.05 | -1.4 | -- | -- | -0.438 | 23.1 | 18 | 1215 | 3.1 | 3.33 |
| 1076.37 | 1.53 | 6.44 | -4.51 | -- | -- | -- | -- | -0.958 | -- | -- | -- | -- | -- |
| 1335.05 | 1.71 | 6.38 | -- | 2.11 | -- | -- | -- | -0.469 | 23 | -- | -- | -- | -- |
| 1410.29 | 1.75 | 6.43 | -- | -- | -2.12 | -- | -- | -0.978 | -- | 21.77 | 688 | 3.68 | 4 |
| 1613.12 | 1.87 | 6.33 | -- | -- | -- | -- | -- | -0.457 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 458.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 2 | 459.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 7 | 463.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 13 | 466.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 21 | 468.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 32 | 469.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 52 | 474.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 59 | 475.32 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 65 | 475.75 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 111 | 477.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 9 |
| 241 | 482.03 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 460 | 487.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 537 | 489.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 789 | 494.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 894 | 496.30 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 972 | 497.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 23 |