Os02g0681200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os02g0681200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.28 | 0.397 | 10.2 | 0.864 | 0.292 | -0.0621 | 0.541 | -2.38 | 0.0906 | 4.24 | 998.1 | 10486 | -- | -- |
| 77.95 | 0.411 | 10.3 | 0.344 | 0.29 | -0.196 | 0.535 | -- | -0.0405 | 4.48 | 1008 | 29418 | -- | -- |
| 72.02 | 0.395 | 10.2 | 0.858 | 0.299 | -0.0663 | -- | -2.38 | 0.0855 | 4.67 | 998.1 | 10422 | -- | -- |
| 77.47 | 0.41 | 10.3 | 0.347 | 0.307 | -0.346 | -- | -- | 0.0211 | 4.62 | 994.8 | 25400 | -- | -- |
| 75.82 | 0.406 | 10.2 | 0.756 | -- | -0.213 | -- | -1.74 | 0.0491 | -- | 1002 | 22498 | -- | -- |
| 79.4 | 0.418 | 10.3 | 0.456 | 0.303 | -- | 0.552 | -- | 0.0054 | 4.23 | -- | -- | -- | -- |
| 80.2 | 0.419 | 10.3 | 0.451 | 0.311 | -- | -- | -- | 0.00238 | 4.59 | -- | -- | -- | -- |
| 82.45 | 0.423 | 10.3 | 0.345 | -- | -0.359 | -- | -- | 0.026 | -- | 994.7 | 25429 | -- | -- |
| 79.11 | 0.414 | 10.3 | -- | 0.307 | -0.476 | -- | -- | -0.137 | 4.63 | 998.1 | 47520 | -- | -- |
| 85.33 | 0.432 | 10.3 | 0.463 | -- | -- | -- | -- | 0.0105 | -- | -- | -- | -- | -- |
| 85.55 | 0.433 | 10.3 | -- | 0.319 | -- | -- | -- | -0.0478 | 4.56 | -- | -- | -- | -- |
| 83.38 | 0.425 | 10.3 | -- | -- | -0.459 | -- | -- | -0.168 | -- | 1007 | 47520 | -- | -- |
| 90.98 | 0.445 | 10.3 | -- | -- | -- | -- | -- | -0.0408 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.27 | humidity | 80 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 2 | 66.29 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 3 | 66.34 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 4 | 66.36 | humidity | 80 | 43200 | < th | dose independent | sin | 5 | NA |
| 6 | 66.37 | humidity | 80 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 8 | 66.44 | humidity | 80 | 43200 | > th | dose independent | sin | 5 | NA |
| 11 | 66.48 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 16 |
| 14 | 66.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 15 | 66.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 22 |
| 22 | 66.63 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 25 | 66.64 | humidity | 80 | 43200 | > th | dose independent | rect. | 19 | 22 |
| 31 | 66.68 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 51 | 66.76 | humidity | 70 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 52 | 66.78 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 89 | 66.92 | humidity | 60 | 43200 | > th | dose dependent | rect. | 2 | 11 |
| 96 | 66.95 | humidity | 60 | 43200 | > th | dose dependent | sin | 5 | NA |
| 101 | 66.98 | humidity | 80 | 43200 | < th | dose independent | no | NA | NA |
| 146 | 67.14 | humidity | 80 | 43200 | > th | dose independent | no | NA | NA |
| 149 | 67.14 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 23 |
| 162 | 67.18 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 177 | 67.23 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 220 | 67.33 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 23 |
| 259 | 67.39 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 281 | 67.44 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 407 | 67.69 | humidity | 60 | 43200 | > th | dose dependent | no | NA | NA |
| 434 | 67.73 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 20 |
| 435 | 67.73 | humidity | 60 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 436 | 67.73 | humidity | 60 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 550 | 67.87 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 15 |
| 569 | 67.88 | humidity | 90 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 574 | 67.89 | humidity | 80 | 43200 | > th | dose independent | sin | 15 | NA |
| 575 | 67.89 | humidity | 80 | 43200 | < th | dose independent | rect. | 14 | 15 |
| 624 | 67.93 | humidity | 80 | 43200 | < th | dose independent | sin | 15 | NA |
| 699 | 68.00 | humidity | 90 | 43200 | < th | dose dependent | no | NA | NA |
| 734 | 68.02 | humidity | 90 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 735 | 68.02 | humidity | 90 | 43200 | < th | dose dependent | rect. | 7 | 23 |
| 798 | 68.07 | humidity | 90 | 43200 | < th | dose dependent | sin | 5 | NA |
| 815 | 68.08 | humidity | 90 | 43200 | < th | dose dependent | sin | 13 | NA |
| 940 | 68.17 | humidity | 80 | 43200 | > th | dose independent | rect. | 15 | 11 |
| 986 | 68.20 | humidity | 50 | 43200 | > th | dose dependent | sin | 14 | NA |
| 987 | 68.20 | humidity | 90 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 996 | 68.21 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 998 | 68.21 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 5 |