Os02g0676800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dehydration responsive element binding protein 1E (DREB1E protein).
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Os02g0676800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dehydration responsive element binding protein 1E (DREB1E protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 384.22 | 0.921 | 3.46 | -0.657 | 0.605 | 1.82 | -1.61 | -3 | -0.51 | 9.89 | 0.8175 | 78 | -- | -- |
| 394.4 | 0.925 | 3.51 | -0.709 | 0.589 | 1.84 | -1.77 | -- | -0.555 | 10.4 | 1.898 | 78 | -- | -- |
| 394.11 | 0.925 | 3.46 | -0.71 | 0.612 | 1.84 | -- | -3.18 | -0.509 | 9.85 | 0.8286 | 78 | -- | -- |
| 405.89 | 0.938 | 3.51 | -0.73 | 0.612 | 1.92 | -- | -- | -0.533 | 10.2 | 2.376 | 78 | -- | -- |
| 415.15 | 0.949 | 3.47 | -0.732 | -- | 1.66 | -- | -3.23 | -0.48 | -- | 1.368 | 61 | -- | -- |
| 435.97 | 0.979 | 3.52 | -1.09 | 0.974 | -- | -2.33 | -- | -0.549 | 13.7 | -- | -- | -- | -- |
| 457.5 | 1 | 3.53 | -1.16 | 0.976 | -- | -- | -- | -0.562 | 13.8 | -- | -- | -- | -- |
| 421.82 | 0.957 | 3.51 | -0.731 | -- | 2.5 | -- | -- | -0.493 | -- | 4.37 | 56 | -- | -- |
| 418.42 | 0.953 | 3.49 | -- | 0.657 | 2.13 | -- | -- | -0.458 | 9.76 | 1.516 | 77 | -- | -- |
| 515.29 | 1.06 | 3.54 | -1.2 | -- | -- | -- | -- | -0.584 | -- | -- | -- | -- | -- |
| 492.96 | 1.04 | 3.5 | -- | 0.997 | -- | -- | -- | -0.433 | 13.8 | -- | -- | -- | -- |
| 433.51 | 0.97 | 3.5 | -- | -- | 2.76 | -- | -- | -0.394 | -- | 4.4 | 56 | -- | -- |
| 553.27 | 1.1 | 3.51 | -- | -- | -- | -- | -- | -0.451 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 377.52 | wind | 1 | 90 | > th | dose dependent | rect. | 8 | 17 |
| 23 | 382.87 | wind | 1 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 25 | 383.22 | wind | 1 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 29 | 383.77 | wind | 1 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 36 | 384.36 | wind | 5 | 90 | > th | dose dependent | rect. | 16 | 22 |
| 45 | 385.47 | wind | 1 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 55 | 385.99 | wind | 1 | 90 | > th | dose dependent | no | NA | NA |
| 65 | 386.34 | wind | 9 | 90 | < th | dose dependent | no | NA | NA |
| 67 | 386.39 | wind | 9 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 80 | 387.22 | wind | 1 | 90 | > th | dose dependent | sin | 4 | NA |
| 89 | 387.57 | wind | 9 | 90 | < th | dose dependent | sin | 4 | NA |
| 100 | 388.02 | wind | 3 | 90 | > th | dose dependent | rect. | 8 | 3 |
| 107 | 388.37 | wind | 1 | 10 | > th | dose dependent | sin | 3 | NA |
| 119 | 388.74 | wind | 9 | 10 | < th | dose dependent | sin | 3 | NA |
| 134 | 389.12 | wind | 3 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 154 | 389.66 | wind | 1 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 182 | 390.44 | wind | 7 | 90 | > th | dose independent | rect. | 16 | 22 |
| 195 | 390.93 | wind | 5 | 10 | > th | dose dependent | rect. | 17 | 21 |
| 210 | 391.29 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 4 |
| 216 | 391.36 | wind | 3 | 90 | > th | dose dependent | rect. | 20 | 18 |
| 224 | 391.48 | wind | 7 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 244 | 391.68 | wind | 1 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 251 | 391.77 | wind | 1 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 255 | 391.81 | wind | 7 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 260 | 391.84 | wind | 7 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 261 | 391.87 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 6 |
| 264 | 391.92 | wind | 5 | 90 | > th | dose independent | rect. | 8 | 3 |
| 265 | 391.92 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 294 | 392.22 | wind | 9 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 297 | 392.28 | wind | 1 | 10 | > th | dose dependent | no | NA | NA |
| 306 | 392.37 | wind | 3 | 90 | < th | dose independent | sin | 3 | NA |
| 320 | 392.52 | wind | 7 | 10 | > th | dose independent | rect. | 17 | 21 |
| 323 | 392.54 | wind | 7 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 325 | 392.57 | wind | 7 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 338 | 392.65 | wind | 3 | 90 | > th | dose independent | sin | 3 | NA |
| 345 | 392.69 | wind | 7 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 346 | 392.71 | wind | 9 | 10 | < th | dose dependent | no | NA | NA |
| 364 | 392.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 373 | 392.91 | wind | 1 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 392 | 393.27 | wind | 3 | 270 | > th | dose independent | rect. | 5 | 5 |
| 398 | 393.35 | wind | 3 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 412 | 393.47 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 442 | 393.63 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 470 | 393.84 | wind | 7 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 482 | 393.93 | wind | 3 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 485 | 393.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 552 | 394.38 | wind | 5 | 90 | > th | dose independent | rect. | 20 | 18 |
| 561 | 394.42 | wind | 5 | 90 | < th | dose independent | rect. | 23 | 23 |
| 580 | 394.57 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 602 | 394.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 612 | 394.71 | wind | 7 | 10 | > th | dose independent | rect. | 20 | 23 |
| 674 | 395.06 | wind | 5 | 90 | < th | dose independent | rect. | 1 | 18 |
| 708 | 395.22 | wind | 5 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 711 | 395.24 | wind | 1 | 90 | > th | dose dependent | rect. | 5 | 9 |
| 712 | 395.24 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 9 |
| 723 | 395.31 | wind | 7 | 10 | < th | dose dependent | rect. | 3 | 16 |
| 738 | 395.38 | wind | 5 | 90 | < th | dose independent | rect. | 3 | 16 |
| 791 | 395.67 | wind | 7 | 90 | > th | dose independent | rect. | 20 | 23 |
| 797 | 395.68 | wind | 9 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 858 | 395.99 | wind | 1 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 871 | 396.09 | temperature | 25 | 90 | > th | dose independent | rect. | 7 | 12 |
| 872 | 396.09 | wind | 7 | 90 | > th | dose independent | rect. | 4 | 22 |
| 881 | 396.11 | wind | 7 | 90 | > th | dose independent | rect. | 7 | 19 |
| 893 | 396.19 | wind | 7 | 90 | < th | dose independent | no | NA | NA |
| 939 | 396.40 | wind | 7 | 10 | > th | dose independent | rect. | 9 | 18 |
| 965 | 396.47 | wind | 7 | 90 | > th | dose independent | rect. | 1 | 23 |
| 971 | 396.51 | wind | 3 | 10 | > th | dose independent | sin | 3 | NA |
| 973 | 396.52 | wind | 3 | 10 | < th | dose independent | sin | 3 | NA |
| 975 | 396.52 | wind | 7 | 10 | > th | dose independent | rect. | 13 | 23 |
| 986 | 396.55 | wind | 7 | 90 | > th | dose independent | no | NA | NA |
| 995 | 396.56 | wind | 7 | 90 | > th | dose independent | sin | 8 | NA |