Os02g0675700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os02g0675700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.51 | 0.561 | 8.87 | -1.18 | 1.37 | -1.21 | 0.105 | 1.32 | -0.317 | 12.6 | 29.7 | 1229 | -- | -- |
| 142.64 | 0.556 | 8.84 | -0.903 | 1.39 | -1.1 | 0.128 | -- | -0.325 | 12.6 | 29.7 | 1217 | -- | -- |
| 142.4 | 0.556 | 8.86 | -1.1 | 1.37 | -1.17 | -- | 0.953 | -0.352 | 12.6 | 29.66 | 1220 | -- | -- |
| 142.68 | 0.556 | 8.84 | -0.901 | 1.37 | -1.08 | -- | -- | -0.326 | 12.6 | 29.67 | 1217 | -- | -- |
| 241.17 | 0.723 | 8.92 | -1.22 | -- | -1.24 | -- | 1.45 | -0.45 | -- | 29.5 | 1717 | -- | -- |
| 197.53 | 0.659 | 8.85 | -0.564 | 1.18 | -- | -0.127 | -- | -0.359 | 12.6 | -- | -- | -- | -- |
| 197.59 | 0.658 | 8.85 | -0.569 | 1.18 | -- | -- | -- | -0.36 | 12.5 | -- | -- | -- | -- |
| 240.97 | 0.723 | 8.89 | -0.915 | -- | -1.09 | -- | -- | -0.454 | -- | 29.37 | 1719 | -- | -- |
| 163.08 | 0.595 | 8.83 | -- | 1.37 | -0.94 | -- | -- | -0.269 | 12.6 | 29.59 | 1209 | -- | -- |
| 285.55 | 0.79 | 8.87 | -0.61 | -- | -- | -- | -- | -0.38 | -- | -- | -- | -- | -- |
| 206.12 | 0.672 | 8.84 | -- | 1.19 | -- | -- | -- | -0.296 | 12.6 | -- | -- | -- | -- |
| 261.48 | 0.753 | 8.85 | -- | -- | -0.853 | -- | -- | -0.276 | -- | 29.75 | 6063 | -- | -- |
| 295.37 | 0.802 | 8.86 | -- | -- | -- | -- | -- | -0.312 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.13 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 5 |
| 3 | 143.07 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 5 |
| 8 | 144.05 | temperature | 30 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 10 | 144.08 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 14 | 144.24 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 30 | 144.34 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 34 | 144.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 40 | 144.40 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 48 | 144.43 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 50 | 144.45 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 72 | 144.62 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 73 | 144.63 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 75 | 144.64 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 76 | 144.64 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 81 | 144.64 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 16 |
| 88 | 144.65 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 137 | 144.73 | temperature | 30 | 14400 | > th | dose dependent | sin | 13 | NA |
| 138 | 144.74 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 5 |
| 141 | 144.75 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 142 | 144.75 | temperature | 30 | 14400 | < th | dose independent | sin | 15 | NA |
| 272 | 145.03 | radiation | 30 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 339 | 145.43 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 14 |
| 344 | 145.49 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 364 | 145.55 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 381 | 145.57 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 405 | 145.64 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 412 | 145.69 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 442 | 145.81 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 536 | 145.86 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 629 | 145.86 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 713 | 145.98 | temperature | 30 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 736 | 146.04 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 821 | 146.29 | humidity | 70 | 1440 | < th | dose independent | sin | 16 | NA |
| 844 | 146.32 | temperature | 30 | 14400 | > th | dose dependent | no | NA | NA |
| 956 | 146.42 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 958 | 146.44 | humidity | 80 | 1440 | < th | dose dependent | sin | 14 | NA |
| 965 | 146.46 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 986 | 146.49 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 7 |