Os02g0675000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0675000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.09 | 0.596 | 9.27 | 1.32 | 3.44 | -1.62 | -0.71 | 1.91 | 0.214 | 17.7 | -0.007874 | 1091 | -- | -- |
| 163.4 | 0.595 | 9.31 | 0.936 | 3.38 | -1.54 | -0.931 | -- | 0.114 | 17.5 | 0.4518 | 1314 | -- | -- |
| 162.29 | 0.593 | 9.27 | 1.34 | 3.44 | -1.64 | -- | 2 | 0.217 | 17.7 | -0.7426 | 1082 | -- | -- |
| 165.25 | 0.599 | 9.32 | 0.935 | 3.39 | -1.58 | -- | -- | 0.111 | 17.6 | -0.9756 | 1193 | -- | -- |
| 752.16 | 1.28 | 9.21 | 1.25 | -- | -2.17 | -- | 1.08 | 0.199 | -- | -27.71 | 1271 | -- | -- |
| 202.9 | 0.668 | 9.37 | 0.46 | 3.47 | -- | -0.998 | -- | -0.162 | 17.4 | -- | -- | -- | -- |
| 205.31 | 0.671 | 9.38 | 0.462 | 3.47 | -- | -- | -- | -0.167 | 17.4 | -- | -- | -- | -- |
| 753.12 | 1.28 | 9.24 | 1.01 | -- | -2.16 | -- | -- | 0.137 | -- | -3.232 | 1277 | -- | -- |
| 185.3 | 0.634 | 9.35 | -- | 3.4 | -1.19 | -- | -- | -0.0502 | 17.6 | 5.438 | 1161 | -- | -- |
| 832.03 | 1.35 | 9.33 | 0.345 | -- | -- | -- | -- | -0.252 | -- | -- | -- | -- | -- |
| 210.92 | 0.679 | 9.39 | -- | 3.46 | -- | -- | -- | -0.219 | 17.4 | -- | -- | -- | -- |
| 776.59 | 1.3 | 9.28 | -- | -- | -1.73 | -- | -- | -0.0369 | -- | 13.88 | 1272 | -- | -- |
| 835.17 | 1.35 | 9.34 | -- | -- | -- | -- | -- | -0.291 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 3 | 153.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 4 | 153.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 6 | 154.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 8 | 154.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 17 |
| 9 | 154.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 27 | 155.74 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 35 | 156.19 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 59 | 157.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 9 |
| 84 | 157.61 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 103 | 158.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 142 | 158.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 186 | 159.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 11 |
| 200 | 159.83 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 6 |
| 203 | 159.84 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 254 | 160.05 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 298 | 160.31 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 308 | 160.36 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 312 | 160.37 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 462 | 161.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 471 | 161.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 474 | 161.18 | wind | 7 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 478 | 161.18 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 555 | 161.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 566 | 161.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 578 | 161.57 | wind | 9 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 784 | 162.45 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 15 |
| 880 | 162.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 949 | 162.99 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |