Os02g0673100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0005 family protein.
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Os02g0673100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function UPF0005 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 203.23 | 0.67 | 3.03 | 0.00673 | 0.362 | 0.182 | 0.632 | 1.35 | 0.169 | 12.2 | 1011 | 4261 | -- | -- |
| 208.54 | 0.673 | 2.99 | 0.489 | 0.355 | 0.24 | 0.628 | -- | 0.291 | 12.3 | 1011 | 47520 | -- | -- |
| 204.96 | 0.667 | 3.03 | 0.0203 | 0.366 | 0.177 | -- | 1.35 | 0.165 | 12.2 | 1011 | 4209 | -- | -- |
| 210.18 | 0.675 | 3 | 0.419 | 0.356 | 0.18 | -- | -- | 0.265 | 12.1 | 1011 | 29339 | -- | -- |
| 213.08 | 0.68 | 3.04 | 0.0166 | -- | 0.185 | -- | 1.35 | 0.168 | -- | 1011 | 4211 | -- | -- |
| 209.4 | 0.678 | 3.01 | 0.265 | 0.36 | -- | 0.637 | -- | 0.206 | 12.4 | -- | -- | -- | -- |
| 211.13 | 0.68 | 3.01 | 0.289 | 0.358 | -- | -- | -- | 0.209 | 12.2 | -- | -- | -- | -- |
| 217.92 | 0.688 | 3.01 | 0.344 | -- | 0.222 | -- | -- | 0.242 | -- | 1013 | 5727 | -- | -- |
| 213.04 | 0.68 | 3.02 | -- | 0.357 | -0.088 | -- | -- | 0.154 | 12.2 | 1009 | 47520 | -- | -- |
| 219.22 | 0.692 | 3.02 | 0.277 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 213.33 | 0.683 | 3.02 | -- | 0.354 | -- | -- | -- | 0.177 | 12.2 | -- | -- | -- | -- |
| 220.48 | 0.692 | 3.02 | -- | -- | 0.198 | -- | -- | 0.196 | -- | 1014 | 4215 | -- | -- |
| 221.24 | 0.694 | 3.02 | -- | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.58 | wind | 7.0 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 3 | 198.69 | wind | 7.0 | 90 | > th | dose independent | rect. | 23 | 2 |
| 5 | 198.91 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 4 |
| 13 | 198.91 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 4 |
| 21 | 198.94 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 25 | 198.94 | wind | 9.0 | 90 | > th | dose independent | rect. | 22 | 12 |
| 26 | 198.94 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 30 | 198.94 | wind | 9.0 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 102 | 200.09 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 104 | 200.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 105 | 200.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 106 | 200.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 107 | 200.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 109 | 200.63 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 112 | 200.63 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 117 | 200.78 | humidity | 70.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 133 | 201.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 134 | 201.73 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 8 |
| 135 | 201.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 136 | 201.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 137 | 201.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 138 | 201.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 14 |
| 152 | 201.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 153 | 201.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 155 | 201.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 165 | 201.96 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 167 | 201.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 168 | 201.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 169 | 201.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 11 |
| 172 | 202.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 173 | 202.00 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 8 |
| 175 | 202.01 | humidity | 60.0 | 30 | < th | dose independent | rect. | 18 | 19 |
| 225 | 202.17 | radiation | 30.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 232 | 202.18 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 240 | 202.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 241 | 202.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 248 | 202.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 251 | 202.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 252 | 202.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 18 |
| 253 | 202.28 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 23 | NA |
| 255 | 202.28 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 23 | NA |
| 273 | 202.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 18 |
| 274 | 202.28 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 23 | NA |
| 276 | 202.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 19 |
| 281 | 202.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 19 |
| 282 | 202.31 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 19 |
| 283 | 202.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 285 | 202.31 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 19 |
| 287 | 202.32 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 8 | 8 |
| 321 | 202.37 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 416 | 202.38 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 515 | 202.40 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 534 | 202.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 18 |
| 546 | 202.50 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 580 | 202.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 591 | 202.54 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 592 | 202.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 22 |
| 593 | 202.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 597 | 202.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 607 | 202.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 638 | 202.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 640 | 202.60 | radiation | 1.0 | 10 | < th | dose independent | rect. | 11 | 5 |
| 646 | 202.61 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 655 | 202.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 680 | 202.64 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 22 |
| 683 | 202.64 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 22 |
| 688 | 202.66 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 691 | 202.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 22 |
| 692 | 202.66 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 22 |
| 700 | 202.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 704 | 202.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 707 | 202.68 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 717 | 202.69 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 764 | 202.73 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 783 | 202.76 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 792 | 202.76 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 820 | 202.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 892 | 202.86 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 939 | 202.90 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 942 | 202.90 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 957 | 202.91 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 23 |
| 961 | 202.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 965 | 202.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 969 | 202.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 996 | 202.95 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 1 |