Os02g0672500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to putaive mitochondrial inner membrane protein [Oryza sativa (japonica cultivar-group)].
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Os02g0672500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to putaive mitochondrial inner membrane protein [Oryza sativa (japonica cultivar-group)].
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.73 | 0.577 | 3.84 | 3.11 | 0.386 | 0.0695 | 0.873 | 2.6 | 0.577 | 15 | 11.4 | 4279 | -- | -- |
| 157.02 | 0.588 | 3.94 | 2.48 | 0.346 | 0.0874 | 0.753 | -- | 0.393 | 15 | 22.2 | 1213 | -- | -- |
| 152.93 | 0.576 | 3.84 | 3.12 | 0.386 | 0.0724 | -- | 2.6 | 0.581 | 14.8 | 10.15 | 4625 | -- | -- |
| 158.64 | 0.587 | 3.93 | 2.56 | 0.362 | -0.182 | -- | -- | 0.443 | 15 | 14.3 | 1145 | -- | -- |
| 159.97 | 0.592 | 3.91 | 2.77 | -- | 0.341 | -- | 2.52 | 0.446 | -- | 10.15 | 4625 | -- | -- |
| 157.14 | 0.588 | 3.94 | 2.49 | 0.38 | -- | 0.774 | -- | 0.407 | 14.9 | -- | -- | -- | -- |
| 159.16 | 0.591 | 3.94 | 2.51 | 0.382 | -- | -- | -- | 0.411 | 14.8 | -- | -- | -- | -- |
| 165.39 | 0.602 | 3.95 | 2.42 | -- | 0.39 | -- | -- | 0.35 | -- | 12.8 | 6888 | -- | -- |
| 189.19 | 0.641 | 4.13 | -- | 0.411 | 1.88 | -- | -- | -0.429 | 14.7 | -24.93 | 47520 | -- | -- |
| 167.58 | 0.605 | 3.94 | 2.49 | -- | -- | -- | -- | 0.402 | -- | -- | -- | -- | -- |
| 325.27 | 0.844 | 4 | -- | 0.332 | -- | -- | -- | 0.132 | 14.8 | -- | -- | -- | -- |
| 199.02 | 0.657 | 4.13 | -- | -- | 1.85 | -- | -- | -0.429 | -- | -20.11 | 47520 | -- | -- |
| 331.69 | 0.85 | 4 | -- | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.83 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 144.57 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 29 | 145.00 | temperature | 30 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 31 | 145.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 14 |
| 32 | 145.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 33 | 145.12 | temperature | 30 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 34 | 145.12 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 35 | 145.12 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 36 | 145.13 | temperature | 30 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 40 | 145.18 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 41 | 145.19 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 51 | 145.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 12 |
| 55 | 145.26 | wind | 3 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 57 | 145.27 | wind | 3 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 60 | 145.32 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 61 | 145.33 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 68 | 145.39 | wind | 3 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 85 | 145.47 | wind | 3 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 109 | 145.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 122 | 145.60 | wind | 5 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 151 | 145.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 161 | 145.80 | radiation | 1 | 43200 | > th | dose independent | rect. | 6 | 5 |
| 163 | 145.82 | radiation | 1 | 43200 | < th | dose independent | rect. | 6 | 5 |
| 167 | 145.82 | temperature | 30 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 171 | 145.83 | temperature | 10 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 181 | 145.86 | wind | 5 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 189 | 145.88 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 190 | 145.89 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 194 | 145.90 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 207 | 145.93 | wind | 1 | 43200 | < th | dose independent | sin | 19 | NA |
| 210 | 145.94 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 216 | 145.95 | wind | 3 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 231 | 145.97 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 244 | 145.99 | wind | 5 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 252 | 146.00 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 300 | 146.03 | wind | 1 | 43200 | > th | dose independent | sin | 19 | NA |
| 305 | 146.03 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 367 | 146.06 | temperature | 30 | 43200 | < th | dose dependent | sin | 6 | NA |
| 368 | 146.06 | temperature | 10 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 370 | 146.06 | temperature | 25 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 398 | 146.07 | temperature | 10 | 43200 | > th | dose dependent | sin | 7 | NA |
| 504 | 146.10 | temperature | 10 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 581 | 146.12 | wind | 1 | 43200 | < th | dose dependent | sin | 19 | NA |
| 668 | 146.14 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 810 | 146.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 883 | 146.19 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 885 | 146.19 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 4 |
| 919 | 146.20 | temperature | 10 | 43200 | > th | dose dependent | rect. | 2 | 1 |