Os02g0669900 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0669900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF632 domain containing protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	5.65	(0.0379)	R²	:	0.696
β₁	:	2.7	(0.14)	R²_dD	:	0.266	R²_D	:	0.317
β₂	:	2.19	(0.0968)	R²_dC	:	0.343	R²_C	:	0.34
β₃	:	0.738	(0.101)	R²_dE	:	0.0411	R²_E	:	0.0824
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.00558	(0.0825)	R²_dN8	:	5.81e-06	R²_N8	:	-0.00168
σ	:	0.704
deviance	:	228.3
__

_____

C
peak time of C	:	7.47
E
wheather	:	temperature
threshold	:	30
memory length	:	1215
response mode	:	> th
dose dependency	:	dose dependent
G
type of G	:	no
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
221.65	0.699	5.58	3.24	2.18	0.348	1.51	3.51	-0.00599	7.4	30.5	1183	--	--
222.13	0.694	5.65	2.67	2.19	0.743	1.52	--	-0.00526	7.39	30.36	1189	--	--
227.77	0.703	5.57	3.36	2.18	0.294	--	4.03	-0.00601	7.46	30.7	1181	--	--
228.3	0.704	5.65	2.7	2.19	0.738	--	--	-0.00558	7.47	30	1215	--	--
479.09	1.02	5.61	3.47	--	0.259	--	4.17	0.0369	--	30.2	1349	--	--
248.31	0.739	5.68	2.86	2.18	--	1.62	--	-0.146	7.18	--	--	--	--
255.11	0.748	5.68	2.89	2.18	--	--	--	-0.148	7.26	--	--	--	--
480.88	1.02	5.7	2.72	--	0.725	--	--	0.0107	--	29.32	1359	--	--
405.4	0.938	5.79	--	2.22	1.36	--	--	-0.544	7.61	25.7	1299	--	--
508.01	1.05	5.73	2.93	--	--	--	--	-0.111	--	--	--	--	--
475.52	1.02	5.75	--	2.21	--	--	--	-0.471	7.18	--	--	--	--
656.54	1.19	5.84	--	--	1.36	--	--	-0.61	--	24.1	1378	--	--
734.5	1.27	5.81	--	--	--	--	--	-0.436	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	211.86	humidity	80.0	720	< th	dose dependent	rect.	19	2
2	212.10	wind	9.0	30	< th	dose dependent	rect.	4	10
3	212.40	temperature	25.0	720	> th	dose dependent	rect.	18	5
13	213.37	wind	9.0	30	< th	dose dependent	rect.	4	12
30	214.55	temperature	25.0	720	> th	dose dependent	rect.	18	12
34	214.61	wind	7.0	30	< th	dose dependent	rect.	4	15
44	215.30	humidity	70.0	720	> th	dose independent	rect.	19	8
46	215.33	humidity	80.0	720	< th	dose independent	rect.	18	3
58	215.87	temperature	30.0	720	< th	dose independent	rect.	16	10
103	217.39	humidity	70.0	720	> th	dose independent	rect.	16	10
111	217.70	temperature	15.0	10	> th	dose independent	rect.	14	14
128	218.18	temperature	25.0	10	< th	dose independent	rect.	6	22
137	218.36	temperature	25.0	30	< th	dose independent	rect.	14	14
140	218.41	temperature	25.0	10	< th	dose independent	rect.	12	16
142	218.43	radiation	40.0	720	< th	dose dependent	rect.	16	1
154	218.70	wind	1.0	270	< th	dose independent	rect.	4	1
160	218.88	temperature	30.0	720	> th	dose independent	rect.	18	1
170	218.88	atmosphere	1010.0	30	< th	dose independent	rect.	4	10
175	218.89	atmosphere	1010.0	30	< th	dose independent	rect.	23	5
176	218.91	wind	5.0	30	< th	dose independent	rect.	4	15
183	219.00	atmosphere	1000.0	10	> th	dose independent	rect.	1	3
188	219.03	atmosphere	1010.0	10	< th	dose independent	rect.	14	14
190	219.10	wind	5.0	30	< th	dose independent	rect.	4	12
214	219.46	wind	1.0	270	< th	dose dependent	rect.	4	1
218	219.57	temperature	15.0	720	> th	dose dependent	rect.	18	4
219	219.59	temperature	25.0	10	< th	dose independent	rect.	24	4
220	219.59	wind	7.0	10	< th	dose independent	rect.	4	10
263	220.04	wind	7.0	30	< th	dose dependent	rect.	4	19
267	220.12	temperature	30.0	720	< th	dose independent	rect.	16	1
296	220.54	wind	1.0	90	< th	dose independent	rect.	4	19
313	220.77	temperature	15.0	30	> th	dose independent	rect.	23	5
317	220.81	temperature	10.0	10	> th	dose dependent	rect.	4	21
318	220.82	temperature	10.0	10	> th	dose dependent	rect.	4	19
350	221.17	wind	1.0	90	< th	dose independent	rect.	4	17
354	221.27	radiation	20.0	720	< th	dose independent	rect.	16	1
355	221.28	wind	1.0	90	< th	dose independent	rect.	4	12
361	221.30	wind	1.0	30	> th	dose independent	sin	4	NA
382	221.53	temperature	15.0	10	> th	dose independent	rect.	16	12
386	221.61	precipitation	0.1	720	< th	dose independent	rect.	17	6
387	221.61	precipitation	0.1	720	< th	dose dependent	rect.	17	6
406	221.65	atmosphere	1010.0	270	< th	dose independent	rect.	23	2
409	221.71	wind	5.0	43200	< th	dose independent	rect.	7	8
413	221.74	wind	5.0	43200	> th	dose independent	rect.	8	7
429	221.87	temperature	30.0	1440	< th	dose independent	rect.	17	5
431	221.88	wind	5.0	43200	< th	dose independent	rect.	24	16
436	221.91	temperature	25.0	10	< th	dose independent	rect.	22	6
447	221.95	temperature	30.0	1440	< th	dose independent	rect.	17	7
452	221.98	wind	5.0	43200	> th	dose independent	rect.	24	16
456	222.01	wind	5.0	43200	> th	dose independent	rect.	2	14
489	222.16	atmosphere	995.0	10	> th	dose independent	rect.	4	21
507	222.23	wind	5.0	43200	> th	dose independent	rect.	11	3
512	222.27	temperature	30.0	720	< th	dose independent	rect.	16	17
513	222.28	wind	5.0	43200	< th	dose independent	sin	3	NA
514	222.28	temperature	15.0	270	> th	dose independent	rect.	23	2
521	222.31	wind	5.0	43200	> th	dose independent	sin	2	NA
523	222.31	precipitation	0.1	10	< th	dose independent	rect.	4	21
524	222.31	precipitation	0.1	10	< th	dose dependent	rect.	4	21
528	222.34	atmosphere	1015.0	30	< th	dose dependent	rect.	23	5
545	222.42	temperature	10.0	720	> th	dose dependent	rect.	17	13
546	222.43	wind	5.0	43200	< th	dose independent	rect.	11	3
558	222.46	wind	1.0	90	< th	dose independent	rect.	1	4
562	222.49	temperature	10.0	720	> th	dose dependent	rect.	18	11
603	222.65	humidity	50.0	10	> th	dose independent	rect.	4	10
607	222.67	atmosphere	1015.0	270	< th	dose dependent	rect.	23	2
614	222.70	wind	9.0	10	< th	dose independent	rect.	4	21
633	222.72	atmosphere	1010.0	30	< th	dose independent	rect.	4	19
645	222.78	wind	9.0	10	< th	dose independent	rect.	1	3
646	222.78	temperature	10.0	10	> th	dose independent	rect.	1	3
649	222.78	humidity	50.0	10	> th	dose independent	rect.	1	3
653	222.78	atmosphere	1010.0	10	< th	dose independent	rect.	1	3
655	222.78	radiation	1.0	10	< th	dose independent	rect.	1	3
663	222.78	temperature	10.0	10	> th	dose independent	rect.	4	21
664	222.78	radiation	1.0	10	< th	dose dependent	rect.	1	3
669	222.79	atmosphere	1010.0	10	< th	dose independent	rect.	16	12
676	222.87	humidity	70.0	1440	> th	dose independent	rect.	19	2
680	222.88	atmosphere	995.0	10	> th	dose dependent	rect.	1	3
705	222.94	precipitation	0.1	270	< th	dose independent	rect.	1	22
707	222.94	precipitation	0.1	270	< th	dose dependent	rect.	1	22
714	222.98	wind	1.0	90	< th	dose independent	rect.	4	3
727	223.04	wind	5.0	43200	> th	dose independent	rect.	18	22
773	223.19	wind	5.0	30	< th	dose independent	rect.	4	19
782	223.26	atmosphere	1005.0	720	< th	dose independent	rect.	17	1
801	223.34	temperature	20.0	90	> th	dose dependent	rect.	3	4
806	223.36	precipitation	0.1	10	< th	dose independent	rect.	4	10
807	223.36	precipitation	0.1	10	< th	dose dependent	rect.	4	10
866	223.48	precipitation	0.1	720	< th	dose independent	rect.	17	22
867	223.48	temperature	30.0	1440	> th	dose dependent	sin	13	NA
871	223.48	precipitation	0.1	720	< th	dose dependent	rect.	17	22
890	223.57	atmosphere	1000.0	10	> th	dose independent	rect.	14	14
895	223.59	temperature	10.0	10	> th	dose dependent	rect.	1	3
899	223.62	temperature	30.0	1440	< th	dose independent	sin	12	NA
901	223.62	radiation	40.0	10	< th	dose independent	rect.	14	14
902	223.62	temperature	30.0	1440	> th	dose dependent	rect.	13	6
923	223.67	wind	9.0	10	< th	dose independent	rect.	14	14
935	223.71	precipitation	0.1	270	< th	dose independent	rect.	17	13
938	223.71	precipitation	0.1	270	< th	dose dependent	rect.	17	13
939	223.72	atmosphere	1010.0	30	< th	dose independent	rect.	4	12
942	223.73	temperature	10.0	10	> th	dose independent	rect.	4	10
944	223.73	atmosphere	995.0	10	> th	dose independent	rect.	4	10
968	223.78	precipitation	0.1	10	< th	dose independent	rect.	1	3
969	223.78	precipitation	0.1	10	< th	dose dependent	rect.	1	3
986	223.79	humidity	50.0	10	> th	dose dependent	rect.	1	3
990	223.80	temperature	30.0	1440	> th	dose independent	sin	13	NA
998	223.82	atmosphere	1000.0	270	> th	dose independent	rect.	23	2
999	223.82	humidity	50.0	10	> th	dose independent	rect.	14	14