Os02g0668000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MscS Mechanosensitive ion channel family protein.
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Os02g0668000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MscS Mechanosensitive ion channel family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.65 | 0.599 | 5.34 | 1.18 | 3.07 | -1.62 | 0.255 | -2.38 | -0.0862 | 8.84 | 7.623 | 9 | 20.8 | -- |
| 170.28 | 0.608 | 5.33 | 1.24 | 3.06 | -1.68 | 0.234 | -- | -0.0798 | 8.9 | 7.631 | 8 | 20.5 | -- |
| 162.85 | 0.594 | 5.34 | 1.18 | 3.07 | -1.62 | -- | -2.4 | -0.0913 | 8.83 | 7.602 | 9 | 20.8 | -- |
| 170.45 | 0.608 | 5.34 | 1.24 | 3.05 | -1.66 | -- | -- | -0.0742 | 8.93 | 7.549 | 7 | 20.5 | -- |
| 277.76 | 0.78 | 5.42 | 1.2 | -- | -2.51 | -- | -0.499 | -0.0655 | -- | 10.13 | 2 | 8.68 | -- |
| 217.11 | 0.691 | 5.33 | 1.2 | 2.94 | -- | 0.442 | -- | -0.0316 | 9.82 | -- | -- | -- | -- |
| 217.85 | 0.691 | 5.33 | 1.22 | 2.94 | -- | -- | -- | -0.0311 | 9.81 | -- | -- | -- | -- |
| 218.06 | 0.691 | 5.41 | 1.21 | -- | -2.91 | -- | -- | -0.0403 | -- | 259.8 | 2 | 8.26 | -- |
| 211.32 | 0.677 | 5.37 | -- | 3.04 | -1.61 | -- | -- | -0.225 | 8.93 | 7.279 | 9 | 20.5 | -- |
| 733.3 | 1.27 | 5.41 | 1.19 | -- | -- | -- | -- | -0.0291 | -- | -- | -- | -- | -- |
| 256.91 | 0.75 | 5.36 | -- | 2.94 | -- | -- | -- | -0.167 | 9.78 | -- | -- | -- | -- |
| 256.87 | 0.749 | 5.44 | -- | -- | -2.91 | -- | -- | -0.173 | -- | 360.9 | 2 | 8.29 | -- |
| 770.49 | 1.3 | 5.44 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.32 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 6 | 161.51 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 21 | 164.02 | radiation | 10.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 22 | 164.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 11 |
| 26 | 164.18 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 15 |
| 51 | 165.73 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 17 |
| 56 | 165.91 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 76 | 166.95 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 95 | 167.80 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 15 |
| 99 | 167.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 103 | 167.94 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 13 |
| 111 | 168.31 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 16 |
| 128 | 168.59 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 142 | 169.12 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 11 |
| 155 | 169.49 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 158 | 169.51 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 13 |
| 159 | 169.51 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 21 |
| 160 | 169.51 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 183 | 170.01 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 200 | 170.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 244 | 170.84 | radiation | 1.0 | 90 | < th | dose independent | sin | 4 | NA |
| 248 | 170.94 | radiation | 1.0 | 90 | > th | dose independent | sin | 4 | NA |
| 295 | 171.57 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 297 | 171.60 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 303 | 171.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 3 |
| 304 | 171.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 306 | 171.70 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 307 | 171.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 309 | 171.70 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 310 | 171.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 313 | 171.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 314 | 171.70 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 316 | 171.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 322 | 171.70 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 410 | 172.51 | wind | 7.0 | 90 | < th | dose independent | rect. | 5 | 20 |
| 514 | 173.19 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 545 | 173.28 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 9 |
| 559 | 173.34 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 563 | 173.38 | temperature | 25.0 | 10 | < th | dose independent | rect. | 1 | 5 |
| 577 | 173.48 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 9 |
| 584 | 173.59 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 636 | 173.82 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 663 | 174.06 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 724 | 174.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 736 | 174.56 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 803 | 174.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 816 | 174.88 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 829 | 174.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 10 |
| 830 | 174.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 848 | 175.03 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 850 | 175.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 899 | 175.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 940 | 175.42 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 19 |
| 944 | 175.43 | humidity | 90.0 | 10 | > th | dose independent | rect. | 1 | 13 |
| 976 | 175.60 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 19 |