FiT-DB / Search/ Help/ Sample detail

Os02g0667500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Major facilitator superfamily MFS_1 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0372) R2 : 0.55
β1 : -1.55 (0.141) R2dD : 0.138 R2D : 0.0113
β2 : 1.77 (0.096) R2dC : 0.326 R2C : 0.299
β3 : -2.1 (0.235) R2dE : 0.0941 R2E : 0.0207
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.835 (0.0801) R2dN8 : 0.141 R2N8 : 0.0262
σ : 0.692
deviance : 220.88
__
_____
C
peak time of C : 7.11
E
wheather : radiation
threshold : 2.26
memory length : 1094
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 10.7
open length of G : 4.02

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
212.83 0.685 9.59 -1.48 1.72 -1.15 1.15 4.16 -0.835 7.11 8.841 1090 11.1 4.13
219.3 0.69 9.59 -1.5 1.73 -2.07 0.875 -- -0.826 7.17 2.334 1051 10.6 4.15
216.22 0.685 9.59 -1.45 1.73 -1.13 -- 4.18 -0.831 7.09 8.976 1094 11 4.23
220.88 0.692 9.6 -1.55 1.77 -2.1 -- -- -0.835 7.11 2.26 1094 10.7 4.02
369.02 0.895 9.63 -1.39 -- -1.6 -- 4.49 -0.822 -- 9.732 1023 10.7 4.62
261.19 0.758 9.55 -1.22 1.79 -- 0.577 -- -0.677 7.32 -- -- -- --
262.08 0.758 9.55 -1.21 1.79 -- -- -- -0.678 7.34 -- -- -- --
259.96 0.751 9.56 -1.31 -- -1.79 -- -- -0.705 -- 238.3 891 9.38 5.45
279.36 0.778 9.55 -- 1.75 -1.33 -- -- -0.619 7.2 3.406 1092 10.7 4.03
432.68 0.972 9.59 -1.18 -- -- -- -- -0.649 -- -- -- -- --
300.62 0.811 9.52 -- 1.78 -- -- -- -0.544 7.39 -- -- -- --
295.97 0.801 9.56 -- -- -1.75 -- -- -0.568 -- 308.9 814 9.54 6.3
469.36 1.01 9.56 -- -- -- -- -- -0.518 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 218.98 radiation 10 1440 < th dose dependent rect. 11 4
3 219.70 atmosphere 1005 720 < th dose independent rect. 20 1
5 220.54 atmosphere 1005 720 < th dose independent rect. 20 3
7 220.71 radiation 10 1440 > th dose independent rect. 11 2
10 220.82 radiation 1 1440 < th dose independent rect. 11 1
18 221.11 radiation 1 1440 < th dose independent rect. 9 4
19 221.11 radiation 1 1440 < th dose dependent rect. 9 4
21 221.30 radiation 1 1440 > th dose independent rect. 9 4
63 223.38 temperature 25 270 > th dose dependent rect. 24 14
65 223.39 temperature 25 270 > th dose dependent rect. 2 12
71 223.42 temperature 25 270 > th dose dependent rect. 6 8
91 224.52 wind 1 14400 < th dose dependent rect. 6 1
94 224.68 radiation 1 1440 < th dose independent rect. 9 1
95 224.68 radiation 1 1440 < th dose dependent rect. 9 1
120 226.39 atmosphere 1005 270 < th dose independent rect. 23 2
124 226.60 temperature 15 270 > th dose dependent rect. 22 16
141 226.89 wind 1 4320 < th dose independent rect. 6 1
147 227.03 temperature 25 270 > th dose dependent sin 6 NA
162 227.39 humidity 80 1440 > th dose dependent rect. 12 2
183 227.89 radiation 1 1440 > th dose independent rect. 9 1
202 228.18 humidity 50 14400 > th dose dependent rect. 6 2
205 228.25 temperature 15 270 > th dose dependent rect. 19 20
221 228.51 radiation 10 1440 < th dose dependent rect. 11 17
245 228.72 humidity 90 4320 > th dose independent rect. 6 1
248 228.74 atmosphere 1005 270 < th dose dependent rect. 1 1
256 228.87 wind 3 1440 < th dose dependent rect. 6 3
257 228.89 humidity 80 1440 > th dose independent rect. 12 2
287 229.20 wind 1 14400 > th dose independent rect. 23 6
296 229.28 wind 3 4320 > th dose independent rect. 8 1
304 229.48 wind 1 1440 > th dose independent rect. 6 1
333 229.90 temperature 30 90 > th dose independent rect. 8 8
361 230.05 wind 1 1440 < th dose independent rect. 6 4
364 230.06 atmosphere 1005 270 > th dose independent rect. 14 18
402 230.39 wind 1 14400 > th dose independent rect. 23 9
423 230.78 atmosphere 1005 10 < th dose dependent rect. 24 6
429 230.89 humidity 90 4320 < th dose independent rect. 6 1
451 231.05 wind 1 14400 < th dose independent rect. 23 6
455 231.17 wind 1 43200 > th dose independent sin 5 NA
458 231.21 temperature 20 270 > th dose independent rect. 20 8
486 231.36 humidity 90 14400 < th dose dependent rect. 6 2
508 231.58 wind 1 43200 > th dose independent rect. 4 8
512 231.61 wind 1 43200 > th dose independent rect. 23 13
515 231.63 wind 3 4320 < th dose independent rect. 8 1
521 231.70 atmosphere 1005 270 < th dose dependent rect. 23 4
531 231.74 wind 1 43200 > th dose independent rect. 12 20
541 231.81 wind 3 4320 > th dose dependent rect. 8 1
549 231.91 wind 1 43200 > th dose independent rect. 2 11
551 231.92 wind 1 1440 > th dose independent rect. 23 1
552 231.92 wind 1 270 < th dose independent rect. 23 2
553 231.92 temperature 20 10 > th dose independent rect. 23 5
560 231.95 humidity 80 1440 < th dose independent rect. 12 2
565 231.98 temperature 20 270 > th dose independent rect. 21 17
571 232.06 wind 1 43200 > th dose independent rect. 16 19
578 232.10 radiation 10 4320 > th dose independent rect. 16 15
600 232.24 wind 1 1440 < th dose independent rect. 6 6
603 232.28 wind 1 43200 < th dose independent rect. 11 21
604 232.28 temperature 10 270 > th dose dependent sin 5 NA
617 232.34 wind 1 43200 < th dose independent rect. 23 14
620 232.37 wind 1 90 < th dose independent rect. 11 17
624 232.39 wind 1 43200 < th dose independent rect. 22 16
651 232.52 atmosphere 1005 1440 > th dose independent rect. 23 1
668 232.58 wind 1 90 < th dose independent rect. 13 15
685 232.68 radiation 20 1440 < th dose independent rect. 12 1
695 232.71 atmosphere 1005 10 > th dose independent rect. 16 17
703 232.78 wind 1 14400 < th dose independent rect. 23 9
706 232.79 temperature 20 270 > th dose independent rect. 19 20
709 232.81 wind 1 90 < th dose independent rect. 20 8
717 232.82 radiation 10 1440 < th dose dependent sin 18 NA
730 232.86 wind 1 43200 > th dose independent rect. 6 3
747 232.86 radiation 10 4320 > th dose independent rect. 15 18
752 232.88 temperature 30 270 < th dose independent sin 6 NA
766 232.95 humidity 80 270 > th dose dependent rect. 20 7
777 233.02 wind 1 43200 > th dose independent rect. 5 6
803 233.18 wind 1 43200 < th dose independent rect. 3 10
822 233.20 wind 1 43200 < th dose independent rect. 22 20
839 233.26 temperature 30 270 < th dose independent rect. 1 11
841 233.26 radiation 40 270 < th dose independent rect. 14 23
842 233.26 atmosphere 995 270 > th dose dependent rect. 3 16
845 233.28 humidity 80 14400 < th dose independent rect. 15 18
857 233.32 humidity 80 14400 < th dose independent rect. 18 18
858 233.32 atmosphere 1005 10 < th dose independent rect. 12 18
861 233.33 humidity 80 14400 > th dose independent rect. 20 17
863 233.33 wind 1 43200 < th dose independent rect. 16 20
882 233.41 wind 1 43200 < th dose independent sin 4 NA
907 233.54 humidity 80 14400 > th dose independent rect. 22 14
917 233.56 humidity 80 14400 > th dose independent rect. 16 16
918 233.56 humidity 80 14400 > th dose independent rect. 18 18
923 233.58 wind 1 270 < th dose dependent rect. 24 1
927 233.60 humidity 80 14400 < th dose independent rect. 20 17
928 233.61 wind 1 43200 < th dose independent rect. 3 12
932 233.62 wind 1 14400 < th dose dependent rect. 3 5
946 233.67 humidity 80 14400 < th dose independent sin 13 NA
956 233.70 wind 1 1440 > th dose independent rect. 6 6
976 233.74 atmosphere 1005 1440 > th dose independent rect. 20 4