Os02g0666000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0666000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 325.05 | 0.847 | 5.18 | 1.46 | 0.756 | -1.73 | 0.33 | -2.02 | -0.798 | 8.36 | 21.2 | 1361 | -- | -- |
| 329.3 | 0.845 | 5.11 | 1.81 | 0.685 | -1.33 | 0.431 | -- | -0.658 | 8.01 | 22.2 | 1160 | -- | -- |
| 325.36 | 0.84 | 5.18 | 1.47 | 0.755 | -1.73 | -- | -2.04 | -0.799 | 8.44 | 21.2 | 1367 | -- | -- |
| 329.74 | 0.846 | 5.11 | 1.77 | 0.687 | -1.33 | -- | -- | -0.663 | 7.95 | 22.21 | 1147 | -- | -- |
| 345.19 | 0.865 | 5.19 | 1.42 | -- | -1.57 | -- | -1.64 | -0.784 | -- | 21.43 | 839 | -- | -- |
| 400.37 | 0.938 | 5.22 | 1.3 | 0.768 | -- | 0.294 | -- | -1.12 | 8.72 | -- | -- | -- | -- |
| 400.65 | 0.937 | 5.22 | 1.31 | 0.766 | -- | -- | -- | -1.12 | 8.79 | -- | -- | -- | -- |
| 347.56 | 0.868 | 5.13 | 1.75 | -- | -1.36 | -- | -- | -0.655 | -- | 22.24 | 782 | -- | -- |
| 404.14 | 0.936 | 5.2 | -- | 0.648 | -0.935 | -- | -- | -0.98 | 7.99 | 22.4 | 939 | -- | -- |
| 433.99 | 0.973 | 5.24 | 1.31 | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
| 445.66 | 0.988 | 5.25 | -- | 0.77 | -- | -- | -- | -1.26 | 8.66 | -- | -- | -- | -- |
| 423.22 | 0.958 | 5.2 | -- | -- | -1.04 | -- | -- | -0.936 | -- | 22.32 | 763 | -- | -- |
| 479.1 | 1.02 | 5.27 | -- | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 2 | 325.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 6 | 326.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 8 | 326.90 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 13 | 327.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 22 | 328.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 49 | 328.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 7 |
| 68 | 329.02 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 88 | 329.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 116 | 329.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 155 | 330.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 161 | 330.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 235 | 331.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 237 | 331.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 254 | 331.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 334 | 332.49 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 372 | 332.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 376 | 332.90 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 391 | 333.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 437 | 333.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 458 | 333.59 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 464 | 333.63 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 482 | 333.73 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 521 | 333.98 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 522 | 333.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 686 | 334.91 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 918 | 336.36 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 933 | 336.47 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |