Os02g0665600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0665600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.45 | 0.496 | 5.64 | 0.502 | 0.739 | -2.81 | -0.742 | 0.967 | 0.122 | 13.8 | 16.77 | 73 | -- | -- |
| 112.49 | 0.494 | 5.66 | 0.418 | 0.712 | -2.7 | -0.661 | -- | 0.0938 | 13.7 | 16.9 | 73 | -- | -- |
| 112.88 | 0.495 | 5.66 | 0.37 | 0.757 | -2.66 | -- | 0.326 | 0.0923 | 14 | 18 | 74 | -- | -- |
| 112.86 | 0.495 | 5.66 | 0.342 | 0.752 | -2.89 | -- | -- | 0.0814 | 14 | 16.28 | 74 | -- | -- |
| 133.68 | 0.538 | 5.68 | 0.293 | -- | -2.35 | -- | 0.487 | -0.00533 | -- | 15.06 | 209 | -- | -- |
| 210.18 | 0.68 | 5.76 | -0.276 | 0.187 | -- | 0.839 | -- | -0.359 | 3.51 | -- | -- | -- | -- |
| 210.85 | 0.68 | 5.76 | -0.29 | 0.262 | -- | -- | -- | -0.364 | 6.04 | -- | -- | -- | -- |
| 133.63 | 0.538 | 5.7 | 0.185 | -- | -2.27 | -- | -- | -0.0487 | -- | 15.1 | 212 | -- | -- |
| 115.28 | 0.5 | 5.68 | -- | 0.733 | -2.46 | -- | -- | 0.0222 | 14 | 18.83 | 72 | -- | -- |
| 214.4 | 0.684 | 5.77 | -0.283 | -- | -- | -- | -- | -0.358 | -- | -- | -- | -- | -- |
| 213.07 | 0.683 | 5.75 | -- | 0.258 | -- | -- | -- | -0.332 | 6.1 | -- | -- | -- | -- |
| 134.48 | 0.54 | 5.7 | -- | -- | -2.2 | -- | -- | -0.0745 | -- | 15.2 | 212 | -- | -- |
| 216.51 | 0.687 | 5.76 | -- | -- | -- | -- | -- | -0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 111.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 112.19 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 4 | 112.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 9 | 113.35 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 16 | 114.95 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 17 | 115.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 19 | 115.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 20 | 115.35 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 23 | 115.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 24 | 115.90 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 49 | 118.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 58 | 118.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 60 | 119.03 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 64 | 119.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 89 | 119.98 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 113 | 121.24 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 132 | 121.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 220 | 124.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 326 | 127.68 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 365 | 129.39 | temperature | 10 | 90 | > th | dose dependent | sin | 23 | NA |
| 392 | 130.02 | temperature | 10 | 270 | > th | dose dependent | sin | 3 | NA |
| 419 | 130.61 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 509 | 132.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 637 | 134.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 678 | 134.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 892 | 136.60 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 17 |
| 926 | 136.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 998 | 137.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |