Os02g0665500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0665500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.1 | 0.602 | 9.99 | 1.89 | 2.01 | -1.1 | 1.18 | 6.44 | 0.227 | 21.5 | 25.24 | 1286 | -- | -- |
| 179.99 | 0.625 | 10.2 | 0.219 | 1.96 | -0.366 | 1.36 | -- | -0.163 | 21.5 | 28.02 | 6960 | -- | -- |
| 168.71 | 0.605 | 9.99 | 1.89 | 2.03 | -1.12 | -- | 6.74 | 0.249 | 21.4 | 24.97 | 1233 | -- | -- |
| 186.46 | 0.636 | 10.2 | 0.148 | 1.97 | -0.324 | -- | -- | -0.184 | 21.4 | 25.33 | 7036 | -- | -- |
| 400.96 | 0.933 | 9.92 | 2.02 | -- | -0.877 | -- | 6.51 | 0.295 | -- | 24.6 | 1384 | -- | -- |
| 185.4 | 0.638 | 10.2 | 0.0823 | 1.96 | -- | 1.34 | -- | -0.236 | 21.4 | -- | -- | -- | -- |
| 191.85 | 0.649 | 10.2 | 0.0348 | 1.96 | -- | -- | -- | -0.237 | 21.3 | -- | -- | -- | -- |
| 406.53 | 0.939 | 10.1 | 0.404 | -- | -0.561 | -- | -- | -0.00704 | -- | 33.38 | 7142 | -- | -- |
| 187.1 | 0.637 | 10.2 | -- | 1.97 | -0.308 | -- | -- | -0.177 | 21.4 | 25.45 | 7025 | -- | -- |
| 415.5 | 0.952 | 10.2 | 0.0439 | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
| 191.88 | 0.648 | 10.2 | -- | 1.96 | -- | -- | -- | -0.241 | 21.3 | -- | -- | -- | -- |
| 403.69 | 0.936 | 10.2 | -- | -- | -0.436 | -- | -- | -0.138 | -- | 33.77 | 7131 | -- | -- |
| 415.55 | 0.951 | 10.2 | -- | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.74 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 3 | 156.09 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 7 | 156.58 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 17 | 157.49 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 18 | 157.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 24 | 157.82 | temperature | 25 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 29 | 157.92 | temperature | 25 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 43 | 158.21 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 46 | 158.29 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 70 | 158.59 | temperature | 25 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 73 | 158.60 | temperature | 25 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 97 | 158.84 | temperature | 25 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 102 | 158.86 | temperature | 30 | 43200 | > th | dose independent | rect. | 14 | 22 |
| 103 | 158.86 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 110 | 158.91 | temperature | 30 | 43200 | > th | dose independent | sin | 13 | NA |
| 116 | 158.93 | temperature | 30 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 132 | 158.94 | temperature | 30 | 43200 | < th | dose independent | sin | 13 | NA |
| 134 | 158.94 | temperature | 30 | 43200 | < th | dose independent | rect. | 14 | 20 |
| 135 | 158.94 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 136 | 158.94 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 141 | 158.95 | temperature | 30 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 145 | 158.95 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 8 |
| 156 | 158.95 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 20 |
| 161 | 158.96 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 288 | 159.03 | temperature | 30 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 315 | 159.04 | temperature | 30 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 318 | 159.05 | temperature | 30 | 43200 | < th | dose independent | no | NA | NA |
| 424 | 159.06 | temperature | 30 | 43200 | > th | dose independent | no | NA | NA |
| 425 | 159.06 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 551 | 159.07 | temperature | 25 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 553 | 159.07 | temperature | 25 | 43200 | > th | dose dependent | rect. | 18 | 16 |
| 589 | 159.09 | temperature | 30 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 603 | 159.10 | temperature | 30 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 881 | 159.33 | temperature | 25 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 889 | 159.34 | temperature | 25 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 896 | 159.35 | temperature | 25 | 43200 | > th | dose dependent | sin | 10 | NA |
| 921 | 159.38 | temperature | 30 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 993 | 159.50 | temperature | 30 | 43200 | > th | dose dependent | rect. | 15 | 3 |