Os02g0665300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteinase inhibitor, propeptide domain containing protein.
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Os02g0665300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteinase inhibitor, propeptide domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349.43 | 0.878 | 3.79 | -0.345 | 0.85 | -0.646 | -0.377 | 2.92 | -0.634 | 2.85 | 70.14 | 821 | -- | -- |
| 362.12 | 0.886 | 3.75 | -0.0911 | 0.886 | -0.548 | -0.608 | -- | -0.565 | 2.7 | 72.96 | 786 | -- | -- |
| 349.85 | 0.871 | 3.79 | -0.349 | 0.833 | -0.631 | -- | 2.96 | -0.635 | 2.78 | 70.54 | 841 | -- | -- |
| 363.29 | 0.888 | 3.75 | -0.073 | 0.894 | -0.591 | -- | -- | -0.56 | 2.88 | 72 | 786 | -- | -- |
| 382.3 | 0.911 | 3.82 | -0.417 | -- | -0.753 | -- | 3.12 | -0.69 | -- | 70 | 1037 | -- | -- |
| 367.14 | 0.898 | 3.75 | -0.028 | 0.896 | -- | -0.784 | -- | -0.536 | 1.46 | -- | -- | -- | -- |
| 369.59 | 0.9 | 3.75 | -0.00211 | 0.898 | -- | -- | -- | -0.532 | 1.56 | -- | -- | -- | -- |
| 395.61 | 0.93 | 3.74 | 0.0741 | -- | 0.468 | -- | -- | -0.499 | -- | 74.89 | 1050 | -- | -- |
| 363.43 | 0.888 | 3.75 | -- | 0.892 | -0.589 | -- | -- | -0.55 | 2.89 | 72.39 | 786 | -- | -- |
| 418.95 | 0.956 | 3.74 | 0.0339 | -- | -- | -- | -- | -0.513 | -- | -- | -- | -- | -- |
| 369.6 | 0.899 | 3.75 | -- | 0.898 | -- | -- | -- | -0.532 | 1.56 | -- | -- | -- | -- |
| 395.76 | 0.93 | 3.74 | -- | -- | 0.467 | -- | -- | -0.507 | -- | 74.89 | 1050 | -- | -- |
| 418.98 | 0.955 | 3.74 | -- | -- | -- | -- | -- | -0.517 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 346.54 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 17 |
| 2 | 346.82 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 7 |
| 4 | 347.25 | humidity | 70.0 | 720 | < th | dose independent | rect. | 15 | 5 |
| 16 | 347.39 | humidity | 70.0 | 720 | < th | dose independent | rect. | 16 | 2 |
| 18 | 347.48 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 1 |
| 22 | 347.55 | humidity | 70.0 | 720 | < th | dose independent | sin | 13 | NA |
| 25 | 347.87 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 5 |
| 40 | 348.14 | humidity | 90.0 | 720 | < th | dose independent | rect. | 12 | 5 |
| 55 | 348.31 | humidity | 70.0 | 720 | > th | dose independent | sin | 16 | NA |
| 59 | 348.37 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 60 | 348.51 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 61 | 348.52 | humidity | 70.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 63 | 348.61 | radiation | 10.0 | 720 | > th | dose independent | rect. | 12 | 20 |
| 70 | 348.87 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 75 | 348.98 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 80 | 349.11 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 10 | 19 |
| 94 | 349.36 | radiation | 40.0 | 720 | < th | dose independent | rect. | 13 | 16 |
| 102 | 349.44 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 12 | 14 |
| 113 | 349.48 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 17 | 22 |
| 132 | 349.68 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 143 | 349.76 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 152 | 349.83 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 12 |
| 153 | 349.83 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 160 | 349.90 | radiation | 40.0 | 720 | < th | dose independent | rect. | 11 | 18 |
| 165 | 349.91 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 5 |
| 166 | 349.92 | humidity | 80.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 172 | 350.00 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 1 | 15 |
| 173 | 350.00 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 21 | 19 |
| 181 | 350.03 | radiation | 10.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 199 | 350.07 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 223 | 350.13 | radiation | 40.0 | 720 | < th | dose independent | sin | 14 | NA |
| 227 | 350.13 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 291 | 350.43 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 5 |
| 295 | 350.46 | humidity | 70.0 | 720 | > th | dose independent | rect. | 24 | 21 |
| 298 | 350.50 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 344 | 350.75 | radiation | 10.0 | 720 | > th | dose independent | sin | 13 | NA |
| 351 | 350.78 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 12 | 7 |
| 367 | 350.82 | radiation | 40.0 | 720 | < th | dose independent | rect. | 13 | 8 |
| 376 | 350.89 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 384 | 350.91 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 12 | 5 |
| 388 | 350.94 | humidity | 70.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 399 | 350.98 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 10 | 11 |
| 400 | 350.98 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 408 | 351.03 | radiation | 40.0 | 720 | < th | dose independent | rect. | 11 | 10 |
| 428 | 351.10 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 435 | 351.13 | radiation | 40.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 501 | 351.41 | radiation | 1.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 516 | 351.45 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 520 | 351.46 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 535 | 351.48 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 549 | 351.53 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 6 | 14 |
| 556 | 351.55 | radiation | 10.0 | 720 | > th | dose independent | rect. | 12 | 6 |
| 598 | 351.60 | temperature | 20.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 599 | 351.60 | temperature | 25.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 601 | 351.61 | humidity | 50.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 610 | 351.64 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 17 | 8 |
| 613 | 351.64 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 657 | 351.71 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 17 |
| 663 | 351.71 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 670 | 351.73 | humidity | 70.0 | 720 | > th | dose independent | no | NA | NA |
| 671 | 351.73 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 725 | 351.76 | humidity | 80.0 | 720 | < th | dose dependent | no | NA | NA |
| 794 | 351.89 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 808 | 351.93 | wind | 3.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 836 | 351.98 | temperature | 15.0 | 90 | > th | dose independent | rect. | 13 | 14 |
| 837 | 351.98 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 17 | 22 |
| 854 | 351.99 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 867 | 352.01 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 13 |
| 874 | 352.02 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 5 |
| 875 | 352.02 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 17 | 7 |
| 898 | 352.02 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 7 |
| 930 | 352.03 | humidity | 70.0 | 720 | < th | dose independent | no | NA | NA |
| 931 | 352.03 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 16 | 5 |
| 932 | 352.03 | humidity | 70.0 | 720 | < th | dose independent | rect. | 6 | 14 |