Os02g0665200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os02g0665200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.15 | 0.211 | 8.91 | 0.176 | 0.211 | 0.773 | 0.714 | 0.665 | 0.0341 | 18.3 | 19.99 | 91 | -- | -- |
| 20.29 | 0.21 | 8.91 | 0.182 | 0.207 | 0.513 | 0.699 | -- | 0.0364 | 18.4 | 20.28 | 78 | -- | -- |
| 21.39 | 0.215 | 8.91 | 0.171 | 0.214 | 0.819 | -- | 0.696 | 0.0344 | 18.3 | 19.67 | 90 | -- | -- |
| 21.46 | 0.216 | 8.9 | 0.173 | 0.212 | 0.502 | -- | -- | 0.0389 | 18.4 | 20.32 | 102 | -- | -- |
| 23.69 | 0.227 | 8.91 | 0.161 | -- | 0.76 | -- | 0.553 | 0.0274 | -- | 19.5 | 79 | -- | -- |
| 21.99 | 0.22 | 8.91 | 0.101 | 0.201 | -- | 0.663 | -- | 0.00312 | 18.7 | -- | -- | -- | -- |
| 23.09 | 0.225 | 8.91 | 0.09 | 0.204 | -- | -- | -- | 0.00481 | 18.9 | -- | -- | -- | -- |
| 23.75 | 0.227 | 8.9 | 0.164 | -- | 0.515 | -- | -- | 0.0296 | -- | 19.85 | 78 | -- | -- |
| 22.18 | 0.219 | 8.91 | -- | 0.208 | 0.38 | -- | -- | 0.0143 | 18.5 | 20.6 | 99 | -- | -- |
| 25.27 | 0.235 | 8.91 | 0.0856 | -- | -- | -- | -- | 0.000948 | -- | -- | -- | -- | -- |
| 23.3 | 0.226 | 8.92 | -- | 0.203 | -- | -- | -- | -0.00521 | 18.9 | -- | -- | -- | -- |
| 24.38 | 0.23 | 8.91 | -- | -- | 0.586 | -- | -- | -0.00222 | -- | 16.07 | 97 | -- | -- |
| 25.46 | 0.236 | 8.91 | -- | -- | -- | -- | -- | -0.00855 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.53 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 2 | 18.54 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 19 | 18.95 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 15 | 14 |
| 21 | 18.98 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 31 | 19.12 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 17 | 8 |
| 38 | 19.17 | atmosphere | 1010 | 720 | < th | dose dependent | rect. | 14 | 8 |
| 82 | 19.33 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 97 | 19.37 | atmosphere | 1000 | 270 | < th | dose independent | sin | 15 | NA |
| 99 | 19.37 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 108 | 19.39 | temperature | 25 | 270 | > th | dose independent | rect. | 18 | 9 |
| 120 | 19.42 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 20 | 7 |
| 141 | 19.45 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 18 | 12 |
| 143 | 19.46 | atmosphere | 1000 | 10 | < th | dose independent | sin | 12 | NA |
| 162 | 19.47 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 180 | 19.50 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 20 | 8 |
| 194 | 19.51 | atmosphere | 1000 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 230 | 19.54 | atmosphere | 1010 | 10 | < th | dose dependent | sin | 12 | NA |
| 240 | 19.55 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 18 | 10 |
| 271 | 19.57 | atmosphere | 1010 | 270 | < th | dose dependent | sin | 14 | NA |
| 294 | 19.59 | atmosphere | 995 | 10 | > th | dose dependent | sin | 11 | NA |
| 349 | 19.62 | atmosphere | 995 | 270 | > th | dose dependent | sin | 14 | NA |
| 380 | 19.64 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 383 | 19.65 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 16 | 12 |
| 412 | 19.67 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 17 | 1 |
| 443 | 19.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 6 |
| 511 | 19.71 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 554 | 19.74 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 2 |
| 561 | 19.74 | atmosphere | 1010 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 592 | 19.76 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 647 | 19.78 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 16 | 3 |
| 682 | 19.79 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 773 | 19.83 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 15 | 14 |
| 806 | 19.84 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 16 | 7 |
| 885 | 19.87 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 20 | 12 |
| 886 | 19.87 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 18 | 14 |
| 910 | 19.88 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 16 | 16 |
| 935 | 19.88 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 979 | 19.90 | temperature | 15 | 90 | > th | dose independent | rect. | 19 | 23 |
| 983 | 19.90 | wind | 9 | 4320 | > th | dose dependent | rect. | 12 | 2 |