Os02g0664700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0664700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.99 | 0.149 | 11.9 | 0.225 | 0.45 | 0.373 | -0.127 | -0.149 | 0.144 | 20.2 | 0.1001 | 1591 | -- | -- |
| 10.01 | 0.147 | 11.9 | 0.227 | 0.452 | 0.373 | -0.129 | -- | 0.145 | 20.2 | 0.06541 | 1602 | -- | -- |
| 10.04 | 0.148 | 11.9 | 0.227 | 0.45 | 0.375 | -- | -0.104 | 0.145 | 20.2 | 0.01521 | 1602 | -- | -- |
| 10.05 | 0.148 | 11.9 | 0.232 | 0.451 | 0.367 | -- | -- | 0.144 | 20.2 | 0.07292 | 1602 | -- | -- |
| 21.03 | 0.214 | 11.9 | 0.23 | -- | 0.376 | -- | -0.321 | 0.15 | -- | 0.1 | 1397 | -- | -- |
| 11.28 | 0.157 | 11.9 | 0.294 | 0.427 | -- | -0.159 | -- | 0.107 | 20.3 | -- | -- | -- | -- |
| 11.36 | 0.158 | 11.9 | 0.299 | 0.427 | -- | -- | -- | 0.107 | 20.3 | -- | -- | -- | -- |
| 20.93 | 0.213 | 11.9 | 0.259 | -- | 0.289 | -- | -- | 0.118 | -- | 0.1 | 1396 | -- | -- |
| 10.43 | 0.15 | 11.9 | -- | 0.454 | 0.385 | -- | -- | 0.138 | 20.5 | 0.04664 | 17901 | -- | -- |
| 21.48 | 0.217 | 11.9 | 0.297 | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
| 13.72 | 0.173 | 11.9 | -- | 0.426 | -- | -- | -- | 0.074 | 20.4 | -- | -- | -- | -- |
| 20.29 | 0.21 | 11.9 | -- | -- | 0.375 | -- | -- | 0.0742 | -- | 0.0145 | 34446 | -- | -- |
| 23.8 | 0.228 | 11.9 | -- | -- | -- | -- | -- | 0.0698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 4 | 9.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 8 | 9.44 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 13 | 9.47 | radiation | 30 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 21 | 9.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 41 | 9.49 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 42 | 9.49 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 10 |
| 46 | 9.52 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 57 | 9.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 62 | 9.53 | radiation | 20 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 68 | 9.54 | humidity | 90 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 85 | 9.54 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 98 | 9.55 | humidity | 80 | 43200 | > th | dose dependent | sin | 16 | NA |
| 99 | 9.55 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 18 |
| 102 | 9.56 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 116 | 9.56 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 15 |
| 120 | 9.57 | humidity | 90 | 43200 | > th | dose independent | sin | 13 | NA |
| 122 | 9.57 | humidity | 90 | 43200 | < th | dose independent | sin | 13 | NA |
| 166 | 9.59 | radiation | 1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 167 | 9.59 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 189 | 9.60 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 204 | 9.61 | radiation | 40 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 215 | 9.61 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 256 | 9.63 | radiation | 10 | 43200 | < th | dose independent | sin | 8 | NA |
| 283 | 9.63 | radiation | 10 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 309 | 9.64 | radiation | 10 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 313 | 9.64 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 359 | 9.64 | radiation | 10 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 382 | 9.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 476 | 9.65 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 20 |
| 482 | 9.65 | humidity | 80 | 43200 | > th | dose dependent | rect. | 21 | 22 |
| 487 | 9.66 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 553 | 9.67 | humidity | 80 | 43200 | > th | dose dependent | no | NA | NA |
| 564 | 9.67 | wind | 1 | 43200 | < th | dose dependent | rect. | 17 | 11 |
| 585 | 9.68 | temperature | 15 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 629 | 9.68 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 8 |
| 699 | 9.69 | radiation | 10 | 43200 | < th | dose dependent | sin | 9 | NA |
| 705 | 9.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 6 |
| 732 | 9.69 | radiation | 30 | 43200 | > th | dose dependent | rect. | 14 | 18 |
| 741 | 9.70 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 756 | 9.70 | radiation | 40 | 43200 | < th | dose independent | rect. | 14 | 19 |
| 761 | 9.70 | radiation | 10 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 765 | 9.70 | humidity | 90 | 43200 | > th | dose dependent | sin | 12 | NA |
| 812 | 9.71 | radiation | 10 | 43200 | < th | dose independent | no | NA | NA |
| 816 | 9.71 | temperature | 15 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 837 | 9.71 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 15 |
| 904 | 9.71 | temperature | 15 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 944 | 9.72 | temperature | 15 | 43200 | > th | dose independent | rect. | 21 | 1 |