Os02g0662300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0662300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6.11 | 0.116 | 2.87 | 0.00937 | 0.0668 | -0.0319 | 0.201 | 0.517 | -0.00686 | 12.9 | 61 | 357 | -- | -- |
| 6.26 | 0.116 | 2.87 | 0.0312 | 0.0693 | 0.0504 | 0.142 | -- | -0.0112 | 12.8 | 52.36 | 356 | -- | -- |
| 6.26 | 0.116 | 2.87 | 0.019 | 0.0681 | -0.0186 | -- | 0.435 | -0.00788 | 13.5 | 62 | 416 | -- | -- |
| 6.32 | 0.117 | 2.87 | 0.0254 | 0.0897 | 0.0473 | -- | -- | -0.013 | 13.4 | 68.97 | 173 | -- | -- |
| 6.53 | 0.119 | 2.87 | 0.0131 | -- | -0.0242 | -- | 0.369 | -0.00865 | -- | 65 | 499 | -- | -- |
| 6.3 | 0.118 | 2.87 | 0.0197 | 0.0626 | -- | 0.159 | -- | -0.00969 | 12.2 | -- | -- | -- | -- |
| 6.39 | 0.118 | 2.87 | 0.0263 | 0.0638 | -- | -- | -- | -0.00863 | 13.1 | -- | -- | -- | -- |
| 6.52 | 0.119 | 2.87 | 0.0252 | -- | -0.0345 | -- | -- | -0.00975 | -- | 82.99 | 119 | -- | -- |
| 6.3 | 0.117 | 2.88 | -- | 0.0946 | 0.0445 | -- | -- | -0.0215 | 13.4 | 68 | 103 | -- | -- |
| 6.65 | 0.12 | 2.87 | 0.0239 | -- | -- | -- | -- | -0.00988 | -- | -- | -- | -- | -- |
| 6.41 | 0.118 | 2.87 | -- | 0.0634 | -- | -- | -- | -0.0116 | 13.1 | -- | -- | -- | -- |
| 6.51 | 0.119 | 2.87 | -- | -- | -0.0362 | -- | -- | -0.013 | -- | 79 | 63 | -- | -- |
| 6.66 | 0.12 | 2.87 | -- | -- | -- | -- | -- | -0.0125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 5.17 | wind | 9 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 5.17 | wind | 9 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 7 | 5.19 | radiation | 1 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 204 | 5.54 | radiation | 1 | 10 | > th | dose independent | rect. | 18 | 1 |
| 230 | 5.63 | radiation | 20 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 245 | 5.65 | humidity | 60 | 270 | < th | dose independent | rect. | 16 | 4 |
| 274 | 5.66 | radiation | 40 | 270 | > th | dose independent | rect. | 15 | 1 |
| 323 | 5.67 | humidity | 60 | 270 | < th | dose independent | rect. | 16 | 1 |
| 329 | 5.69 | humidity | 60 | 270 | > th | dose independent | sin | 13 | NA |
| 330 | 5.70 | humidity | 60 | 270 | < th | dose independent | sin | 13 | NA |
| 344 | 5.71 | humidity | 60 | 270 | < th | dose dependent | rect. | 16 | 1 |
| 345 | 5.71 | humidity | 60 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 361 | 5.72 | wind | 1 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 384 | 5.76 | wind | 9 | 10 | > th | dose dependent | sin | 11 | NA |
| 405 | 5.79 | wind | 1 | 270 | < th | dose independent | rect. | 15 | 1 |
| 420 | 5.80 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 17 | 1 |
| 428 | 5.81 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 2 |
| 472 | 5.83 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 553 | 5.86 | humidity | 80 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 559 | 5.87 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 611 | 5.88 | humidity | 80 | 10 | < th | dose dependent | rect. | 17 | 5 |
| 615 | 5.89 | wind | 9 | 10 | > th | dose independent | sin | 12 | NA |
| 637 | 5.90 | wind | 9 | 10 | < th | dose independent | sin | 12 | NA |
| 639 | 5.90 | humidity | 80 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 679 | 5.92 | humidity | 70 | 270 | < th | dose dependent | sin | 13 | NA |
| 681 | 5.92 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 14 | 3 |
| 690 | 5.93 | humidity | 80 | 10 | < th | dose independent | rect. | 12 | 1 |
| 744 | 5.94 | radiation | 20 | 270 | < th | dose independent | sin | 13 | NA |
| 745 | 5.94 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 1 |
| 767 | 5.94 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 14 | 1 |
| 807 | 5.95 | wind | 3 | 270 | < th | dose independent | rect. | 13 | 3 |
| 811 | 5.95 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 860 | 5.96 | wind | 7 | 10 | < th | dose independent | rect. | 12 | 1 |
| 864 | 5.96 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 4 |
| 885 | 5.97 | radiation | 30 | 30 | < th | dose independent | rect. | 12 | 1 |
| 896 | 5.97 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 7 |
| 921 | 5.97 | wind | 7 | 14400 | > th | dose dependent | rect. | 3 | 8 |
| 935 | 5.98 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 936 | 5.98 | wind | 3 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 938 | 5.98 | humidity | 80 | 30 | < th | dose independent | rect. | 17 | 1 |
| 940 | 5.98 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 12 | 1 |
| 942 | 5.98 | humidity | 80 | 90 | < th | dose independent | rect. | 11 | 2 |
| 947 | 5.98 | wind | 3 | 43200 | > th | dose independent | rect. | 23 | 4 |
| 953 | 5.98 | humidity | 90 | 90 | < th | dose independent | rect. | 9 | 7 |
| 965 | 5.98 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 12 |