Os02g0661800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acid phosphatase/vanadium-dependent haloperoxidase family protein.
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Os02g0661800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acid phosphatase/vanadium-dependent haloperoxidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.88 | 0.462 | 6.97 | -1.34 | 0.706 | -1.96 | -0.629 | 0.093 | -0.36 | 19.6 | 28.73 | 271 | -- | -- |
| 96.89 | 0.458 | 6.97 | -1.33 | 0.706 | -1.96 | -0.641 | -- | -0.357 | 19.6 | 28.7 | 274 | -- | -- |
| 97.9 | 0.461 | 6.97 | -1.36 | 0.705 | -1.97 | -- | 0.255 | -0.37 | 19.8 | 28.7 | 270 | -- | -- |
| 97.99 | 0.461 | 6.97 | -1.32 | 0.704 | -1.98 | -- | -- | -0.362 | 19.8 | 28.64 | 269 | -- | -- |
| 113.78 | 0.497 | 6.98 | -1.51 | -- | -2.52 | -- | 0.345 | -0.471 | -- | 29.9 | 409 | -- | -- |
| 150.31 | 0.575 | 6.88 | -0.817 | 1.17 | -- | -0.688 | -- | 0.0626 | 18.3 | -- | -- | -- | -- |
| 151.48 | 0.576 | 6.88 | -0.809 | 1.17 | -- | -- | -- | 0.0601 | 18.3 | -- | -- | -- | -- |
| 113.92 | 0.497 | 6.97 | -1.45 | -- | -2.51 | -- | -- | -0.454 | -- | 29.85 | 409 | -- | -- |
| 139.04 | 0.549 | 6.9 | -- | 0.765 | -1.44 | -- | -- | -0.141 | 19.1 | 29.66 | 270 | -- | -- |
| 221.98 | 0.696 | 6.86 | -0.84 | -- | -- | -- | -- | 0.0349 | -- | -- | -- | -- | -- |
| 168.72 | 0.608 | 6.86 | -- | 1.18 | -- | -- | -- | 0.15 | 18.2 | -- | -- | -- | -- |
| 164.15 | 0.597 | 6.91 | -- | -- | -2.03 | -- | -- | -0.2 | -- | 30.26 | 388 | -- | -- |
| 240.6 | 0.724 | 6.84 | -- | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 2 | 93.62 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 13 | 95.04 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 49 | 97.29 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 51 | 97.32 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 53 | 97.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 101 | 98.65 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 18 |
| 137 | 99.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 138 | 99.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 175 | 99.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 8 | 20 |
| 202 | 99.51 | temperature | 25 | 270 | < th | dose dependent | sin | 21 | NA |
| 211 | 99.55 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 339 | 100.07 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 398 | 100.28 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 533 | 100.78 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 545 | 100.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 15 |
| 625 | 101.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 653 | 101.14 | temperature | 10 | 1440 | > th | dose dependent | sin | 10 | NA |
| 993 | 102.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 23 |