Os02g0659600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0659600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.87 | 0.273 | 11 | 0.556 | 0.905 | 1.02 | 0.0499 | -0.5 | -0.0558 | 18.7 | 24.2 | 773 | -- | -- |
| 34.19 | 0.272 | 11 | 0.501 | 0.9 | 1.08 | 0.164 | -- | -0.0728 | 18.7 | 24 | 786 | -- | -- |
| 33.87 | 0.271 | 11 | 0.556 | 0.906 | 1.02 | -- | -0.507 | -0.0567 | 18.7 | 24.12 | 770 | -- | -- |
| 34.21 | 0.272 | 11 | 0.489 | 0.907 | 1.1 | -- | -- | -0.0709 | 18.8 | 23.97 | 785 | -- | -- |
| 69.57 | 0.388 | 11 | 0.715 | -- | 1.03 | -- | -1.13 | -0.0506 | -- | 38.94 | 1305 | -- | -- |
| 50.86 | 0.334 | 11 | 0.176 | 0.843 | -- | 0.136 | -- | -0.279 | 18.2 | -- | -- | -- | -- |
| 50.91 | 0.334 | 11 | 0.175 | 0.843 | -- | -- | -- | -0.279 | 18.2 | -- | -- | -- | -- |
| 70.63 | 0.391 | 11 | 0.465 | -- | 1 | -- | -- | -0.115 | -- | 39.07 | 1318 | -- | -- |
| 39.41 | 0.292 | 11 | -- | 0.894 | 0.872 | -- | -- | -0.16 | 18.7 | 23.97 | 730 | -- | -- |
| 87.81 | 0.438 | 11 | 0.152 | -- | -- | -- | -- | -0.297 | -- | -- | -- | -- | -- |
| 51.72 | 0.336 | 11.1 | -- | 0.841 | -- | -- | -- | -0.298 | 18.2 | -- | -- | -- | -- |
| 75.59 | 0.405 | 11 | -- | -- | 0.809 | -- | -- | -0.195 | -- | 83.75 | 1309 | -- | -- |
| 88.42 | 0.439 | 11 | -- | -- | -- | -- | -- | -0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.86 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 2 | 31.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 15 | 31.81 | temperature | 15 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 20 | 31.95 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 30 | 32.08 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 33 | 32.13 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 57 | 32.38 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 70 | 32.46 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 248 | 33.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 369 | 34.07 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 402 | 34.21 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 448 | 34.39 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 468 | 34.50 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 472 | 34.51 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 645 | 35.04 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 656 | 35.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 670 | 35.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 725 | 35.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 770 | 35.32 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 17 |
| 784 | 35.37 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 812 | 35.43 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 10 |
| 834 | 35.48 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 987 | 35.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 8 |