Os02g0658300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0658300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.46 | 0.32 | 9.58 | -0.0736 | 0.812 | -0.923 | 0.612 | 0.312 | -0.14 | 16.6 | 36.51 | 90 | -- | -- |
| 46.69 | 0.318 | 9.57 | -0.0649 | 0.834 | -0.957 | 0.468 | -- | -0.135 | 16.5 | 42.5 | 86 | -- | -- |
| 47.2 | 0.32 | 9.57 | -0.067 | 0.85 | -0.909 | -- | 0.0136 | -0.134 | 16.3 | 41.82 | 90 | -- | -- |
| 47.14 | 0.32 | 9.57 | -0.0574 | 0.886 | -0.912 | -- | -- | -0.119 | 16.2 | 45.09 | 69 | -- | -- |
| 54.45 | 0.344 | 9.56 | -0.108 | -- | -1.25 | -- | 0.0857 | -0.126 | -- | 13.78 | 288 | -- | -- |
| 59.99 | 0.363 | 9.55 | -0.0385 | 1.35 | -- | 0.126 | -- | -0.0738 | 14.8 | -- | -- | -- | -- |
| 60.04 | 0.363 | 9.55 | -0.0355 | 1.35 | -- | -- | -- | -0.0731 | 14.8 | -- | -- | -- | -- |
| 54.41 | 0.344 | 9.57 | -0.0996 | -- | -1.24 | -- | -- | -0.145 | -- | 13.7 | 288 | -- | -- |
| 47.2 | 0.32 | 9.57 | -- | 0.883 | -0.94 | -- | -- | -0.118 | 16.3 | 45.59 | 69 | -- | -- |
| 165.37 | 0.601 | 9.56 | -0.0929 | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
| 60.08 | 0.363 | 9.55 | -- | 1.35 | -- | -- | -- | -0.0691 | 14.8 | -- | -- | -- | -- |
| 54.66 | 0.344 | 9.56 | -- | -- | -1.24 | -- | -- | -0.133 | -- | 13.3 | 289 | -- | -- |
| 165.59 | 0.601 | 9.55 | -- | -- | -- | -- | -- | -0.0971 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.92 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 7 | 39.38 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 8 | 39.72 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 9 | 39.79 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 12 | 39.87 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 18 | 40.14 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 26 | 40.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 34 | 40.44 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 42 | 40.64 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 46 | 40.71 | radiation | 20.0 | 90 | < th | dose independent | rect. | 13 | 20 |
| 51 | 40.76 | radiation | 30.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 52 | 40.77 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 2 | 7 |
| 62 | 40.94 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 63 | 40.96 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 65 | 40.98 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 72 | 41.09 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 6 |
| 74 | 41.12 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 131 | 41.63 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 144 | 41.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 152 | 41.82 | radiation | 10.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 155 | 41.84 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 157 | 41.86 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 13 |
| 181 | 42.00 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 183 | 42.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 8 |
| 185 | 42.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 197 | 42.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 199 | 42.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 200 | 42.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 201 | 42.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 209 | 42.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 221 | 42.21 | humidity | 70.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 223 | 42.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 224 | 42.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 225 | 42.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 240 | 42.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 241 | 42.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 243 | 42.30 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 244 | 42.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 246 | 42.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 247 | 42.30 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 249 | 42.30 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 261 | 42.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 286 | 42.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 296 | 42.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 300 | 42.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 307 | 42.55 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 9 |
| 318 | 42.61 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 321 | 42.61 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 323 | 42.62 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 338 | 42.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 349 | 42.72 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 357 | 42.74 | radiation | 20.0 | 90 | < th | dose independent | rect. | 17 | 16 |
| 360 | 42.74 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 17 |
| 361 | 42.74 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 365 | 42.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 368 | 42.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 375 | 42.79 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 7 |
| 376 | 42.79 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 393 | 42.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 394 | 42.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 396 | 42.87 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 397 | 42.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 400 | 42.87 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 401 | 42.87 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 405 | 42.87 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 416 | 42.92 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 418 | 42.93 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 16 |
| 419 | 42.93 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 423 | 42.95 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 435 | 42.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 440 | 42.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 442 | 42.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 443 | 42.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 445 | 42.99 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 446 | 42.99 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 448 | 42.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 453 | 43.00 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 15 |
| 466 | 43.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 485 | 43.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 7 |
| 512 | 43.21 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 7 |
| 524 | 43.24 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 528 | 43.25 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 12 | 21 |
| 531 | 43.27 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 548 | 43.30 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 575 | 43.36 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 608 | 43.45 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 8 |
| 614 | 43.46 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 617 | 43.48 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 627 | 43.51 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 650 | 43.61 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 16 |
| 684 | 43.69 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 697 | 43.71 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 733 | 43.83 | humidity | 50.0 | 30 | > th | dose independent | rect. | 17 | 16 |
| 776 | 43.90 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 7 |
| 783 | 43.92 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 814 | 43.99 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 8 |
| 817 | 43.99 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 16 |
| 847 | 44.02 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 852 | 44.03 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 860 | 44.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 861 | 44.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 863 | 44.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 864 | 44.04 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 869 | 44.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 870 | 44.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 872 | 44.04 | radiation | 40.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 873 | 44.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 879 | 44.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 7 |
| 882 | 44.05 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 884 | 44.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 888 | 44.07 | radiation | 10.0 | 270 | < th | dose independent | sin | 4 | NA |
| 917 | 44.11 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 942 | 44.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 950 | 44.19 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 957 | 44.20 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 972 | 44.23 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 977 | 44.24 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 989 | 44.27 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |