Os02g0655800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0655800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 169.64 | 0.612 | 7.95 | -0.78 | 0.03 | 1.92 | -2.46 | -0.803 | -0.146 | 15.5 | 81 | 1132 | -- | -- |
| 170.31 | 0.608 | 7.95 | -0.705 | 0.0241 | 1.88 | -2.42 | -- | -0.151 | 15.6 | 81.69 | 1135 | -- | -- |
| 183.57 | 0.631 | 7.97 | -0.73 | 0.324 | 1.78 | -- | -0.216 | -0.152 | 21.4 | 81.89 | 1263 | -- | -- |
| 183.47 | 0.631 | 7.96 | -0.758 | 0.311 | 1.78 | -- | -- | -0.146 | 21.4 | 80.84 | 1258 | -- | -- |
| 186.99 | 0.637 | 7.95 | -0.756 | -- | 1.88 | -- | 0.0563 | -0.15 | -- | 81.17 | 1169 | -- | -- |
| 241.81 | 0.729 | 7.96 | -0.398 | 0.489 | -- | 1.93 | -- | -0.203 | 1.12 | -- | -- | -- | -- |
| 254.36 | 0.747 | 7.97 | -0.461 | 0.53 | -- | -- | -- | -0.209 | 23.3 | -- | -- | -- | -- |
| 186.99 | 0.637 | 7.95 | -0.762 | -- | 1.88 | -- | -- | -0.15 | -- | 81.12 | 1169 | -- | -- |
| 196.84 | 0.653 | 7.97 | -- | 0.337 | 1.76 | -- | -- | -0.209 | 21.3 | 120 | 1278 | -- | -- |
| 271.96 | 0.771 | 7.96 | -0.448 | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
| 259.96 | 0.754 | 7.96 | -- | 0.525 | -- | -- | -- | -0.157 | 23.3 | -- | -- | -- | -- |
| 200.36 | 0.659 | 7.96 | -- | -- | 1.92 | -- | -- | -0.211 | -- | 145.5 | 1168 | -- | -- |
| 277.24 | 0.777 | 7.95 | -- | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.95 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 17 | 165.93 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 19 | 166.25 | temperature | 25 | 720 | > th | dose dependent | sin | 13 | NA |
| 37 | 168.61 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |
| 39 | 168.68 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 61 | 170.71 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 64 | 170.99 | humidity | 50 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 66 | 171.06 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 8 |
| 104 | 173.41 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 17 |
| 114 | 174.04 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 15 |
| 127 | 174.68 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 128 | 174.71 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 142 | 174.89 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 187 | 175.97 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 18 |
| 197 | 176.54 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 242 | 177.39 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 5 |
| 268 | 177.54 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 272 | 177.59 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 275 | 177.65 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 276 | 177.65 | humidity | 80 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 313 | 177.86 | humidity | 80 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 318 | 177.89 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 363 | 178.20 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 366 | 178.21 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 370 | 178.22 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 429 | 178.52 | humidity | 80 | 1440 | < th | dose dependent | sin | 19 | NA |
| 448 | 178.59 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 466 | 178.69 | humidity | 90 | 1440 | < th | dose dependent | sin | 22 | NA |
| 500 | 178.81 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 502 | 178.81 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 703 | 179.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 726 | 179.81 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 752 | 179.97 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 8 |
| 756 | 179.99 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 777 | 180.09 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 833 | 180.36 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 877 | 180.55 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 16 |
| 885 | 180.61 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 16 |
| 897 | 180.69 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 900 | 180.70 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 9 |
| 950 | 180.91 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 970 | 181.02 | humidity | 60 | 1440 | > th | dose independent | rect. | 13 | 6 |