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Os02g0655700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Amino acid/polyamine transporter I family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.015) R2 : 0.0297
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.118 (0.0315) R2dN8 : 0.0384 R2N8 : 0.0297
σ : 0.282
deviance : 36.47
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.96 0.225 11.2 0.673 0.393 0.0762 0.279 -2.37 0.211 11 29.99 1496 -- --
24.05 0.23 11.2 0.241 0.375 -0.208 0.249 -- 0.166 10.3 30.16 45056 -- --
23.26 0.225 11.2 0.663 0.392 0.0607 -- -2.36 0.217 10.9 29.89 1587 -- --
24.24 0.231 11.2 0.248 0.365 -0.193 -- -- 0.156 10.2 29.89 1587 -- --
32.15 0.266 11.2 0.262 -- -0.232 -- -0.293 0.161 -- 29.89 1587 -- --
25.2 0.235 11.2 0.261 0.386 -- 0.252 -- 0.149 10.8 -- -- -- --
25.47 0.236 11.2 0.272 0.385 -- -- -- 0.149 10.8 -- -- -- --
32.18 0.265 11.2 0.236 -- -0.254 -- -- 0.158 -- 29.9 1607 -- --
25 0.233 11.2 -- 0.404 -0.226 -- -- 0.151 10.9 29.9 2806 -- --
34.64 0.275 11.2 0.264 -- -- -- -- 0.147 -- -- -- -- --
27.41 0.245 11.2 -- 0.383 -- -- -- 0.119 10.8 -- -- -- --
33.36 0.27 11.2 -- -- -0.274 -- -- 0.13 -- 29.8 1595 -- --
36.47 0.282 11.2 -- -- -- -- -- 0.118 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.96 humidity 50.0 14400 < th dose independent sin 11 NA
2 21.96 humidity 50.0 14400 < th dose independent rect. 16 20
4 22.01 humidity 50.0 14400 > th dose independent sin 11 NA
5 22.03 humidity 50.0 14400 > th dose independent rect. 15 20
8 22.14 humidity 50.0 14400 < th dose independent rect. 17 18
9 22.16 wind 1.0 14400 < th dose independent rect. 5 1
10 22.18 humidity 50.0 14400 < th dose independent rect. 15 2
13 22.21 wind 1.0 1440 < th dose independent rect. 3 2
33 22.32 humidity 60.0 14400 < th dose dependent rect. 17 17
34 22.33 wind 9.0 14400 > th dose dependent rect. 18 17
35 22.35 humidity 50.0 14400 > th dose independent rect. 15 2
37 22.37 humidity 50.0 14400 > th dose independent rect. 15 5
42 22.37 humidity 50.0 14400 > th dose independent rect. 15 14
53 22.38 wind 1.0 4320 < th dose dependent rect. 2 5
54 22.42 atmosphere 1000.0 43200 > th dose independent rect. 21 1
55 22.42 atmosphere 1000.0 43200 < th dose independent rect. 21 1
58 22.43 atmosphere 1000.0 43200 > th dose independent rect. 23 1
67 22.45 humidity 50.0 14400 > th dose independent rect. 17 17
68 22.46 atmosphere 1005.0 14400 < th dose dependent rect. 11 1
70 22.47 wind 9.0 14400 > th dose dependent rect. 18 13
84 22.51 atmosphere 1000.0 14400 < th dose independent rect. 12 1
87 22.51 wind 1.0 1440 < th dose dependent rect. 2 3
89 22.52 atmosphere 1000.0 14400 > th dose independent rect. 11 2
106 22.54 wind 1.0 1440 > th dose independent rect. 3 2
129 22.57 wind 1.0 4320 < th dose independent rect. 2 5
140 22.57 wind 9.0 14400 > th dose dependent rect. 20 15
151 22.58 humidity 60.0 14400 < th dose dependent rect. 16 19
168 22.60 wind 9.0 14400 > th dose independent rect. 18 17
183 22.61 atmosphere 1005.0 14400 < th dose dependent sin 23 NA
199 22.62 wind 9.0 14400 < th dose independent rect. 18 17
261 22.65 wind 9.0 14400 > th dose independent rect. 18 12
265 22.65 wind 9.0 14400 < th dose independent rect. 18 15
267 22.65 precipitation 0.1 43200 > th dose dependent rect. 20 1
355 22.69 humidity 60.0 4320 < th dose independent rect. 12 1
365 22.69 wind 9.0 14400 > th dose independent rect. 20 15
366 22.69 wind 9.0 14400 < th dose independent rect. 20 15
398 22.70 wind 9.0 14400 > th dose independent rect. 20 10
401 22.70 wind 9.0 14400 < th dose independent rect. 20 13
408 22.70 wind 9.0 14400 > th dose dependent rect. 20 10
441 22.71 humidity 70.0 14400 < th dose dependent rect. 10 1
444 22.71 atmosphere 1000.0 43200 < th dose dependent rect. 19 1
445 22.71 wind 9.0 14400 > th dose dependent rect. 18 3
489 22.72 wind 1.0 4320 > th dose independent rect. 2 5
499 22.72 atmosphere 1005.0 14400 < th dose dependent no NA NA
523 22.72 atmosphere 1005.0 14400 < th dose dependent rect. 17 22
531 22.72 atmosphere 1005.0 14400 < th dose dependent rect. 15 23
549 22.73 precipitation 0.1 43200 > th dose dependent rect. 16 2
591 22.74 wind 9.0 14400 < th dose independent rect. 20 10
601 22.74 precipitation 0.1 43200 > th dose dependent rect. 17 4
629 22.75 atmosphere 1000.0 14400 > th dose independent rect. 4 10
634 22.75 atmosphere 1000.0 14400 < th dose independent rect. 9 11
648 22.75 wind 9.0 14400 > th dose dependent rect. 18 6
668 22.76 atmosphere 1000.0 14400 < th dose independent sin 23 NA
687 22.76 atmosphere 1000.0 14400 < th dose independent rect. 4 17
722 22.77 temperature 30.0 4320 < th dose independent rect. 1 8
736 22.77 atmosphere 1000.0 14400 > th dose independent rect. 8 12
773 22.78 atmosphere 1000.0 14400 > th dose independent sin 23 NA
806 22.78 atmosphere 1000.0 14400 > th dose independent rect. 4 17
832 22.79 humidity 60.0 4320 > th dose independent rect. 12 1
906 22.80 precipitation 0.1 4320 > th dose independent rect. 10 8
953 22.81 atmosphere 1000.0 14400 > th dose independent rect. 4 1
962 22.81 precipitation 0.1 4320 < th dose independent rect. 10 8
989 22.81 humidity 60.0 14400 < th dose dependent sin 11 NA
996 22.81 precipitation 0.1 4320 < th dose dependent rect. 10 8