Os02g0651200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0651200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.1 | 0.536 | 6.6 | 1.51 | 1.69 | -1.4 | 0.695 | 2.63 | 0.419 | 0.657 | 26.02 | 10 | -- | -- |
| 132.11 | 0.535 | 6.63 | 1.26 | 1.7 | -1.17 | 0.463 | -- | 0.368 | 0.628 | 25.73 | 12 | -- | -- |
| 131.9 | 0.535 | 6.61 | 1.41 | 1.69 | -1.38 | -- | 1.79 | 0.399 | 0.596 | 25.98 | 9 | -- | -- |
| 132.83 | 0.537 | 6.63 | 1.25 | 1.69 | -1.22 | -- | -- | 0.367 | 0.593 | 25.74 | 9 | -- | -- |
| 258.79 | 0.753 | 6.52 | 1.85 | -- | -2.8 | -- | 3.15 | 0.669 | -- | 24.6 | 7 | -- | -- |
| 152.42 | 0.579 | 6.64 | 1.09 | 2.07 | -- | 0.75 | -- | 0.309 | 1.08 | -- | -- | -- | -- |
| 154.76 | 0.583 | 6.65 | 1.06 | 2.07 | -- | -- | -- | 0.305 | 1.06 | -- | -- | -- | -- |
| 262.84 | 0.755 | 6.56 | 1.49 | -- | -2.53 | -- | -- | 0.574 | -- | 24.57 | 2 | -- | -- |
| 171.7 | 0.61 | 6.66 | -- | 1.83 | -0.923 | -- | -- | 0.212 | 0.793 | 26.31 | 9 | -- | -- |
| 419.75 | 0.957 | 6.61 | 1.14 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 184.57 | 0.636 | 6.67 | -- | 2.08 | -- | -- | -- | 0.186 | 1.08 | -- | -- | -- | -- |
| 320.21 | 0.833 | 6.6 | -- | -- | -2.31 | -- | -- | 0.39 | -- | 24.6 | 2 | -- | -- |
| 454.14 | 0.995 | 6.64 | -- | -- | -- | -- | -- | 0.219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 12 |
| 2 | 128.34 | temperature | 30 | 720 | < th | dose independent | rect. | 11 | 1 |
| 4 | 128.50 | humidity | 80 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 6 | 128.58 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 14 | 129.67 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 15 | 129.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 17 | 129.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 18 | 130.00 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 23 | 130.09 | temperature | 15 | 30 | > th | dose dependent | rect. | 5 | 13 |
| 27 | 130.19 | humidity | 60 | 720 | < th | dose independent | rect. | 12 | 3 |
| 29 | 130.30 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 31 | 130.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 40 | 130.42 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 46 | 130.54 | temperature | 30 | 720 | < th | dose independent | rect. | 24 | 12 |
| 52 | 130.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 4 |
| 63 | 130.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 67 | 130.89 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 69 | 130.96 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 16 |
| 82 | 131.17 | humidity | 70 | 720 | < th | dose dependent | rect. | 12 | 3 |
| 122 | 131.51 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 133 | 131.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 145 | 131.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 147 | 131.62 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 150 | 131.64 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 160 | 131.70 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 171 | 131.78 | temperature | 30 | 720 | < th | dose independent | rect. | 9 | 3 |
| 172 | 131.78 | temperature | 25 | 10 | > th | dose dependent | sin | 1 | NA |
| 241 | 132.35 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 258 | 132.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 269 | 132.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 11 |
| 308 | 132.62 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 7 |
| 310 | 132.62 | temperature | 30 | 720 | < th | dose independent | rect. | 3 | 8 |
| 357 | 132.80 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 382 | 132.92 | temperature | 30 | 720 | < th | dose independent | rect. | 2 | 10 |
| 392 | 132.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 404 | 133.05 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 12 |
| 406 | 133.05 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 421 | 133.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 458 | 133.34 | temperature | 30 | 720 | > th | dose independent | sin | 5 | NA |
| 498 | 133.43 | humidity | 60 | 720 | > th | dose independent | rect. | 24 | 16 |
| 524 | 133.49 | temperature | 30 | 720 | < th | dose independent | rect. | 22 | 14 |
| 525 | 133.49 | humidity | 70 | 10 | < th | dose independent | rect. | 12 | 23 |
| 538 | 133.55 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 9 |
| 563 | 133.62 | humidity | 90 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 608 | 133.79 | temperature | 30 | 270 | < th | dose independent | rect. | 22 | 21 |
| 611 | 133.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 644 | 133.93 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 11 |
| 645 | 133.93 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 676 | 134.05 | humidity | 50 | 270 | > th | dose dependent | rect. | 8 | 11 |
| 684 | 134.06 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 698 | 134.12 | temperature | 30 | 720 | < th | dose independent | sin | 5 | NA |
| 731 | 134.28 | temperature | 30 | 720 | < th | dose independent | rect. | 20 | 16 |
| 732 | 134.29 | temperature | 30 | 10 | < th | dose independent | rect. | 11 | 8 |
| 776 | 134.58 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 1 |
| 783 | 134.60 | humidity | 50 | 720 | > th | dose dependent | rect. | 24 | 16 |
| 815 | 134.69 | humidity | 50 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 817 | 134.70 | humidity | 60 | 720 | > th | dose independent | rect. | 24 | 19 |
| 853 | 134.80 | temperature | 25 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 873 | 134.83 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 877 | 134.84 | humidity | 70 | 90 | > th | dose independent | rect. | 9 | 20 |
| 911 | 134.96 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 918 | 134.99 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 3 |
| 924 | 135.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 943 | 135.06 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 14 |
| 1000 | 135.26 | humidity | 60 | 720 | > th | dose independent | rect. | 24 | 21 |