Os02g0651100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0651100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.87 | 0.554 | 9.61 | 0.0644 | 0.356 | 0.851 | -0.559 | 0.272 | -0.722 | 21.9 | 40.28 | 701 | -- | -- |
| 138.88 | 0.549 | 9.61 | 0.0435 | 0.353 | 0.886 | -0.516 | -- | -0.728 | 22.2 | 40.79 | 692 | -- | -- |
| 139.9 | 0.551 | 9.61 | 0.0843 | 0.367 | 0.863 | -- | 0.131 | -0.727 | 22.3 | 40.79 | 693 | -- | -- |
| 139.9 | 0.551 | 9.61 | 0.0643 | 0.355 | 0.888 | -- | -- | -0.73 | 22.4 | 40.81 | 693 | -- | -- |
| 146.57 | 0.564 | 9.61 | 0.0959 | -- | 0.984 | -- | 0.227 | -0.742 | -- | 40.8 | 734 | -- | -- |
| 158.35 | 0.59 | 9.59 | 0.167 | 0.772 | -- | -0.346 | -- | -0.57 | 19.7 | -- | -- | -- | -- |
| 158.69 | 0.59 | 9.59 | 0.176 | 0.773 | -- | -- | -- | -0.571 | 19.7 | -- | -- | -- | -- |
| 146.55 | 0.564 | 9.61 | 0.049 | -- | 0.985 | -- | -- | -0.756 | -- | 40.79 | 734 | -- | -- |
| 140 | 0.551 | 9.61 | -- | 0.349 | 0.903 | -- | -- | -0.738 | 22.5 | 40.79 | 693 | -- | -- |
| 190.83 | 0.645 | 9.57 | 0.166 | -- | -- | -- | -- | -0.582 | -- | -- | -- | -- | -- |
| 159.51 | 0.591 | 9.59 | -- | 0.771 | -- | -- | -- | -0.59 | 19.7 | -- | -- | -- | -- |
| 146.62 | 0.564 | 9.61 | -- | -- | 0.996 | -- | -- | -0.764 | -- | 40.8 | 734 | -- | -- |
| 191.55 | 0.646 | 9.57 | -- | -- | -- | -- | -- | -0.6 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.81 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 2 | 129.04 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 129.50 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 2 |
| 20 | 130.25 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 30 | 130.42 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 38 | 130.70 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 39 | 130.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 40 | 130.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 43 | 130.86 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 53 | 131.10 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 10 | 2 |
| 55 | 131.11 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 58 | 131.26 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 59 | 131.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 64 | 131.34 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 70 | 131.48 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 7 |
| 72 | 131.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 73 | 131.52 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 74 | 131.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 75 | 131.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 91 | 131.69 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 97 | 131.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 98 | 131.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 109 | 131.87 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 110 | 131.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 120 | 132.08 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 122 | 132.11 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 123 | 132.12 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 128 | 132.15 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 129 | 132.18 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 160 | 132.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 161 | 132.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 177 | 132.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 178 | 132.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 211 | 132.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 228 | 132.95 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 6 | 6 |
| 235 | 132.99 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 237 | 132.99 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 241 | 133.01 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 272 | 133.14 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 350 | 133.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 360 | 133.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 377 | 133.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 380 | 133.62 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 389 | 133.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 402 | 133.68 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 404 | 133.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 405 | 133.68 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 414 | 133.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 425 | 133.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 430 | 133.76 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 455 | 133.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 511 | 134.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 516 | 134.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 556 | 134.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 561 | 134.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 567 | 134.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 571 | 134.22 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 24 | 12 |
| 588 | 134.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 620 | 134.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 633 | 134.34 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 636 | 134.34 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 667 | 134.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 695 | 134.48 | wind | 9.0 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 704 | 134.51 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 719 | 134.56 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 2 |
| 746 | 134.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 758 | 134.63 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 782 | 134.69 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 790 | 134.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 804 | 134.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 902 | 134.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 997 | 135.05 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 10 | 2 |