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Os02g0650500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Protein kinase-like (Protein serine/threonine kinase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.22 (0.0152) R2 : 0.362
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.577 (0.038) R2dC : 0.323 R2C : 0.318
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.158 (0.0321) R2dN8 : 0.044 R2N8 : 0.0393
σ : 0.288
deviance : 37.79
__
_____
C
peak time of C : 2.98
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.29 0.241 9.19 0.595 0.369 0.306 0.395 -0.278 0.25 4.94 10.91 51 -- --
26.71 0.241 9.19 0.613 0.368 0.31 0.368 -- 0.253 4.96 10.89 51 -- --
26.65 0.24 9.2 0.596 0.372 0.298 -- -0.201 0.246 4.82 10.85 53 -- --
26.87 0.241 9.2 0.598 0.372 0.296 -- -- 0.245 4.8 10.91 50 -- --
29.41 0.253 9.19 0.486 -- 0.497 -- -0.0176 0.27 -- 6.887 330 -- --
29.33 0.254 9.21 0.567 0.566 -- 0.0757 -- 0.222 2.99 -- -- -- --
29.35 0.254 9.21 0.566 0.566 -- -- -- 0.221 2.97 -- -- -- --
27.54 0.244 9.2 0.589 -- 0.518 -- -- 0.248 -- 1.847 378 -- --
35.92 0.279 9.21 -- 0.423 0.352 -- -- 0.187 4.63 19.54 69 -- --
47.75 0.323 9.2 0.59 -- -- -- -- 0.236 -- -- -- -- --
37.79 0.288 9.22 -- 0.577 -- -- -- 0.158 2.98 -- -- -- --
37.07 0.284 9.2 -- -- 0.514 -- -- 0.235 -- 3.22 396 -- --
56.93 0.352 9.22 -- -- -- -- -- 0.171 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.62 radiation 40.0 30 < th dose dependent rect. 12 21
10 25.72 radiation 10.0 30 < th dose independent rect. 4 16
13 25.73 radiation 40.0 270 < th dose dependent rect. 2 14
14 25.73 radiation 40.0 270 < th dose dependent rect. 11 19
17 25.78 temperature 25.0 720 < th dose dependent rect. 1 1
19 25.79 radiation 20.0 30 < th dose dependent rect. 4 16
22 25.80 humidity 50.0 30 > th dose dependent rect. 13 20
26 25.81 radiation 10.0 270 < th dose dependent rect. 2 15
28 25.82 humidity 80.0 90 > th dose independent rect. 4 15
29 25.82 temperature 20.0 270 > th dose dependent rect. 2 5
36 25.86 wind 5.0 4320 > th dose dependent rect. 20 8
39 25.87 radiation 40.0 270 < th dose independent rect. 11 19
40 25.87 temperature 15.0 270 > th dose dependent rect. 3 3
43 25.88 radiation 1.0 270 < th dose independent rect. 3 15
44 25.88 radiation 40.0 270 < th dose independent rect. 10 21
55 25.89 radiation 40.0 10 < th dose dependent rect. 10 23
70 25.96 temperature 20.0 270 > th dose independent rect. 3 3
82 25.99 radiation 20.0 30 < th dose dependent rect. 23 23
89 26.01 humidity 80.0 90 > th dose independent sin 3 NA
90 26.01 temperature 20.0 270 > th dose independent rect. 2 5
91 26.01 radiation 20.0 90 < th dose independent rect. 13 20
94 26.01 humidity 50.0 30 > th dose dependent rect. 15 18
104 26.03 radiation 30.0 10 < th dose independent rect. 12 21
115 26.05 temperature 15.0 270 > th dose dependent rect. 4 1
121 26.06 radiation 20.0 90 < th dose independent rect. 11 22
129 26.07 radiation 40.0 90 < th dose dependent sin 3 NA
141 26.09 temperature 20.0 720 > th dose dependent rect. 23 7
143 26.09 humidity 70.0 270 > th dose dependent rect. 2 15
149 26.10 temperature 15.0 10 > th dose dependent rect. 2 7
153 26.11 radiation 10.0 30 > th dose independent rect. 9 9
181 26.12 humidity 70.0 90 > th dose dependent rect. 4 14
186 26.13 humidity 70.0 90 > th dose dependent sin 3 NA
211 26.16 temperature 20.0 270 > th dose independent rect. 4 1
222 26.17 radiation 10.0 30 < th dose independent rect. 23 23
229 26.18 temperature 15.0 30 > th dose independent rect. 9 19
239 26.19 wind 3.0 1440 < th dose independent rect. 2 1
240 26.19 wind 7.0 4320 > th dose independent rect. 20 8
253 26.20 atmosphere 1010.0 30 < th dose independent rect. 20 8
263 26.21 radiation 1.0 270 > th dose independent sin 2 NA
266 26.21 temperature 20.0 270 > th dose independent rect. 2 15
301 26.23 radiation 20.0 30 < th dose dependent rect. 21 23
335 26.27 wind 7.0 4320 < th dose independent rect. 20 8
336 26.27 temperature 15.0 30 > th dose independent rect. 20 8
341 26.27 temperature 10.0 720 > th dose dependent rect. 23 7
347 26.28 wind 3.0 1440 > th dose independent rect. 2 1
362 26.29 radiation 30.0 270 < th dose independent rect. 2 15
401 26.32 radiation 40.0 10 < th dose dependent sin 3 NA
416 26.33 radiation 10.0 270 < th dose dependent sin 4 NA
421 26.33 temperature 10.0 30 > th dose dependent rect. 20 8
429 26.34 wind 9.0 4320 < th dose independent rect. 20 1
439 26.34 humidity 50.0 30 > th dose dependent rect. 17 16
442 26.35 atmosphere 1010.0 270 < th dose independent rect. 18 8
465 26.36 radiation 10.0 270 < th dose dependent rect. 2 6
492 26.38 temperature 15.0 270 > th dose independent rect. 18 8
519 26.39 radiation 20.0 90 < th dose dependent rect. 1 23
523 26.40 radiation 10.0 30 < th dose independent rect. 21 23
527 26.40 temperature 10.0 720 > th dose dependent rect. 21 9
561 26.42 humidity 70.0 720 > th dose dependent rect. 11 3
570 26.43 temperature 25.0 270 < th dose independent rect. 12 9
575 26.43 radiation 10.0 30 < th dose independent rect. 4 20
589 26.44 radiation 10.0 30 > th dose independent rect. 9 6
592 26.44 humidity 70.0 30 > th dose independent rect. 12 21
614 26.45 humidity 80.0 720 > th dose independent rect. 11 3
637 26.46 radiation 20.0 90 < th dose independent sin 5 NA
656 26.47 radiation 1.0 270 < th dose independent sin 2 NA
657 26.47 humidity 80.0 10 < th dose independent rect. 9 8
663 26.47 radiation 20.0 30 < th dose dependent sin 23 NA
680 26.48 temperature 15.0 30 > th dose independent rect. 20 16
681 26.48 temperature 15.0 30 > th dose independent rect. 9 17
683 26.48 temperature 15.0 270 > th dose independent rect. 6 20
685 26.48 humidity 80.0 270 > th dose independent rect. 23 20
688 26.48 radiation 40.0 720 < th dose dependent rect. 13 1
692 26.48 radiation 40.0 270 < th dose dependent rect. 11 7
706 26.48 radiation 40.0 10 < th dose dependent rect. 17 23
715 26.49 precipitation 0.1 30 < th dose independent rect. 9 19
717 26.49 radiation 1.0 270 > th dose independent rect. 17 22
722 26.49 temperature 30.0 720 < th dose dependent rect. 13 1
735 26.49 precipitation 0.1 30 < th dose dependent rect. 9 19
738 26.49 radiation 20.0 30 < th dose dependent rect. 4 20
747 26.50 temperature 15.0 1440 > th dose independent rect. 10 14
754 26.50 radiation 10.0 30 < th dose independent rect. 2 23
760 26.50 humidity 50.0 10 > th dose dependent rect. 12 8
777 26.51 wind 1.0 43200 < th dose independent rect. 4 3
796 26.51 wind 7.0 4320 > th dose dependent rect. 20 14
805 26.52 radiation 10.0 30 > th dose independent sin 0 NA
807 26.52 radiation 20.0 720 < th dose independent rect. 13 1
835 26.53 radiation 10.0 270 < th dose independent rect. 2 5
837 26.53 radiation 1.0 720 > th dose independent rect. 7 10
865 26.54 wind 1.0 10 > th dose independent rect. 9 6
872 26.54 atmosphere 1015.0 30 < th dose independent rect. 9 19
890 26.55 humidity 80.0 270 > th dose independent rect. 2 4
893 26.55 wind 9.0 4320 < th dose independent rect. 20 13
947 26.57 radiation 30.0 30 < th dose independent rect. 4 5
958 26.57 atmosphere 1015.0 270 < th dose independent rect. 6 20
960 26.57 radiation 10.0 30 < th dose independent rect. 23 21
961 26.57 temperature 15.0 270 > th dose independent rect. 5 22
981 26.57 radiation 40.0 10 < th dose dependent rect. 2 23
987 26.58 radiation 10.0 30 < th dose independent sin 0 NA
988 26.58 humidity 70.0 30 > th dose independent rect. 4 5