Os02g0647900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Fatty aldehyde dehydrogenase 1.
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Os02g0647900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Fatty aldehyde dehydrogenase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.63 | 0.541 | 9.81 | -2.61 | 0.883 | 3.02 | -0.192 | 0.321 | -0.145 | 9.92 | 12.08 | 1242 | -- | -- |
| 132.72 | 0.537 | 9.82 | -2.68 | 0.875 | 3.02 | -0.214 | -- | -0.164 | 9.91 | 12.6 | 1248 | -- | -- |
| 132.77 | 0.537 | 9.81 | -2.6 | 0.884 | 3.02 | -- | 0.384 | -0.142 | 9.94 | 12.31 | 1241 | -- | -- |
| 132.89 | 0.537 | 9.82 | -2.68 | 0.895 | 3.03 | -- | -- | -0.165 | 9.95 | 14.07 | 1231 | -- | -- |
| 166.81 | 0.602 | 9.83 | -2.59 | -- | 2.91 | -- | 0.488 | -0.134 | -- | 9.813 | 1461 | -- | -- |
| 281.21 | 0.786 | 9.7 | -1.76 | 0.741 | -- | -0.469 | -- | 0.373 | 8.51 | -- | -- | -- | -- |
| 281.91 | 0.786 | 9.7 | -1.77 | 0.742 | -- | -- | -- | 0.373 | 8.54 | -- | -- | -- | -- |
| 166.96 | 0.602 | 9.84 | -2.7 | -- | 2.91 | -- | -- | -0.16 | -- | 10.43 | 1458 | -- | -- |
| 297.24 | 0.803 | 9.7 | -- | 1.24 | 2.16 | -- | -- | 0.298 | 8.72 | 13.1 | 730 | -- | -- |
| 312.78 | 0.826 | 9.72 | -1.77 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 364.53 | 0.893 | 9.66 | -- | 0.736 | -- | -- | -- | 0.57 | 8.72 | -- | -- | -- | -- |
| 322.01 | 0.836 | 9.74 | -- | -- | 1.35 | -- | -- | 0.309 | -- | 21.65 | 1430 | -- | -- |
| 395.2 | 0.928 | 9.68 | -- | -- | -- | -- | -- | 0.576 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 6 | 129.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 27 | 132.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 28 | 132.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 30 | 132.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 110 | 133.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 121 | 133.94 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 124 | 133.96 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 310 | 134.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 415 | 135.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 470 | 135.31 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 471 | 135.31 | temperature | 10 | 1440 | > th | dose dependent | sin | 5 | NA |
| 509 | 135.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 815 | 137.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 890 | 137.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 944 | 137.54 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 963 | 137.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 23 |