Os02g0646500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldehyde dehydrogenase NAD(P)-dependent family protein.
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Os02g0646500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldehyde dehydrogenase NAD(P)-dependent family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 180.7 | 0.632 | 9.4 | -4.45 | 1.73 | 2.91 | 0.149 | -4.14 | -0.287 | 7.85 | 21.06 | 1448 | -- | -- |
| 195.48 | 0.651 | 9.25 | -3.15 | 1.74 | 2.73 | 0.27 | -- | 0.0637 | 8.06 | 20.63 | 1357 | -- | -- |
| 179.37 | 0.624 | 9.39 | -4.45 | 1.75 | 2.95 | -- | -4.26 | -0.272 | 8.04 | 21.49 | 1376 | -- | -- |
| 195.13 | 0.651 | 9.25 | -3.82 | 1.66 | 3.08 | -- | -- | -0.0532 | 7.84 | 17.42 | 5654 | -- | -- |
| 340.36 | 0.859 | 9.42 | -4.27 | -- | 2.88 | -- | -3.84 | -0.212 | -- | 21.49 | 1407 | -- | -- |
| 431.75 | 0.974 | 9.11 | -2.2 | 1.75 | -- | 0.261 | -- | 0.701 | 7.46 | -- | -- | -- | -- |
| 431.93 | 0.973 | 9.11 | -2.19 | 1.75 | -- | -- | -- | 0.7 | 7.46 | -- | -- | -- | -- |
| 352.8 | 0.875 | 9.37 | -4.09 | -- | 3.76 | -- | -- | -0.274 | -- | -5.332 | 7176 | -- | -- |
| 455.21 | 0.994 | 9.13 | -- | 2.4 | 2.68 | -- | -- | 0.577 | 7.92 | 16.82 | 778 | -- | -- |
| 596.21 | 1.14 | 9.15 | -2.17 | -- | -- | -- | -- | 0.728 | -- | -- | -- | -- | -- |
| 558.71 | 1.11 | 9.05 | -- | 1.73 | -- | -- | -- | 0.945 | 7.55 | -- | -- | -- | -- |
| 610.75 | 1.15 | 9.16 | -- | -- | 1.63 | -- | -- | 0.693 | -- | 22.2 | 2818 | -- | -- |
| 719.95 | 1.25 | 9.09 | -- | -- | -- | -- | -- | 0.969 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 172.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 5 | 174.91 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 6 | 175.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 8 | 175.90 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 24 | 180.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 19 |
| 36 | 181.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 61 | 181.84 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 73 | 181.90 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 93 | 182.90 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 95 | 182.92 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 99 | 182.94 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 132 | 183.93 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 186 | 184.96 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 187 | 184.98 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 206 | 185.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 16 | 11 |
| 211 | 185.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 247 | 185.75 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 284 | 186.11 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 286 | 186.13 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 17 |
| 289 | 186.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 359 | 186.65 | radiation | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 373 | 186.75 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 19 |
| 376 | 186.76 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 400 | 186.89 | radiation | 1 | 43200 | < th | dose independent | sin | 16 | NA |
| 449 | 187.18 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 462 | 187.20 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 463 | 187.21 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 479 | 187.32 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 482 | 187.34 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 14 |
| 490 | 187.38 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 18 |
| 498 | 187.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 545 | 187.63 | radiation | 1 | 43200 | > th | dose independent | sin | 16 | NA |
| 676 | 188.18 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 702 | 188.32 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 721 | 188.39 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 746 | 188.52 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 770 | 188.62 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 797 | 188.75 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 812 | 188.80 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 823 | 188.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 840 | 188.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 890 | 189.11 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 912 | 189.18 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 916 | 189.19 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 923 | 189.20 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 17 |
| 929 | 189.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 932 | 189.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 20 |
| 947 | 189.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 15 |
| 965 | 189.30 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 992 | 189.34 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |