Os02g0644400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0644400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.8 | 0.481 | 9.39 | 1.29 | 0.671 | -1.4 | 1.84 | -1.15 | 0.956 | 4.81 | 1004 | 29460 | -- | -- |
| 106.53 | 0.481 | 9.42 | 1 | 0.694 | -1.33 | 1.91 | -- | 0.934 | 4.75 | 1002 | 30452 | -- | -- |
| 113.44 | 0.496 | 9.39 | 1.3 | 0.698 | -1.4 | -- | -1.23 | 0.961 | 4.96 | 1004 | 29643 | -- | -- |
| 115.58 | 0.501 | 9.43 | 0.989 | 0.677 | -1.32 | -- | -- | 0.931 | 4.88 | 1002 | 30513 | -- | -- |
| 138.01 | 0.547 | 9.4 | 1.3 | -- | -1.44 | -- | -1.24 | 0.965 | -- | 1004 | 29807 | -- | -- |
| 153.83 | 0.581 | 9.38 | 1.72 | 0.697 | -- | 1.92 | -- | 1.15 | 4.66 | -- | -- | -- | -- |
| 163.54 | 0.599 | 9.39 | 1.71 | 0.711 | -- | -- | -- | 1.14 | 4.79 | -- | -- | -- | -- |
| 140.37 | 0.552 | 9.46 | 0.958 | -- | -1.43 | -- | -- | 0.879 | -- | 1003 | 29841 | -- | -- |
| 127.38 | 0.526 | 9.53 | -- | 0.693 | -1.89 | -- | -- | 0.558 | 4.75 | 998.2 | 47520 | -- | -- |
| 190.31 | 0.645 | 9.4 | 1.74 | -- | -- | -- | -- | 1.15 | -- | -- | -- | -- | -- |
| 240.53 | 0.725 | 9.43 | -- | 0.743 | -- | -- | -- | 0.945 | 4.72 | -- | -- | -- | -- |
| 152.3 | 0.575 | 9.53 | -- | -- | -2.02 | -- | -- | 0.564 | -- | 998.8 | 47520 | -- | -- |
| 269.79 | 0.767 | 9.44 | -- | -- | -- | -- | -- | 0.962 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.62 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 107.15 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 3 | 108.21 | wind | 7.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 4 | 108.27 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 8 | 109.83 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 19 | 110.93 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 20 | 111.09 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 22 | 111.17 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 32 | 111.47 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 35 | 111.52 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 48 | 111.59 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 101 | 111.94 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 21 | 14 |
| 136 | 112.04 | atmosphere | 1005.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 170 | 112.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 214 | 112.24 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 23 | 12 |
| 260 | 112.33 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 3 | 21 |
| 285 | 112.36 | atmosphere | 1005.0 | 14400 | > th | dose dependent | no | NA | NA |
| 318 | 112.39 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 326 | 112.40 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 349 | 112.41 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 8 | 23 |
| 351 | 112.42 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 372 | 112.44 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 379 | 112.45 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 395 | 112.48 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 448 | 112.56 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 449 | 112.56 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 453 | 112.57 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 495 | 112.67 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 572 | 112.88 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 577 | 112.90 | humidity | 50.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 607 | 112.99 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 615 | 113.03 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 616 | 113.03 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 619 | 113.03 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 621 | 113.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 634 | 113.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 637 | 113.08 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 638 | 113.08 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 644 | 113.10 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 655 | 113.15 | humidity | 50.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 662 | 113.18 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 665 | 113.19 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 676 | 113.23 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 679 | 113.26 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 682 | 113.26 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 709 | 113.32 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 714 | 113.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 720 | 113.36 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 722 | 113.36 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 723 | 113.36 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 727 | 113.38 | humidity | 50.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 735 | 113.39 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 740 | 113.40 | atmosphere | 1010.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 751 | 113.41 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 772 | 113.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 774 | 113.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 793 | 113.50 | atmosphere | 1010.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 813 | 113.55 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 824 | 113.58 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 17 | 13 |
| 855 | 113.66 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 859 | 113.67 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 871 | 113.69 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 892 | 113.75 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 910 | 113.76 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 914 | 113.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 963 | 113.91 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 964 | 113.91 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 8 |