Os02g0644100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heat shock protein STI (Stress inducible protein) (GmSTI).
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Os02g0644100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heat shock protein STI (Stress inducible protein) (GmSTI).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.36 | 0.408 | 10.9 | 0.932 | 0.472 | -0.892 | -0.551 | -1.37 | 0.318 | 9.91 | 7.351 | 27 | -- | -- |
| 78.21 | 0.412 | 10.9 | 0.924 | 0.471 | -0.873 | 0.95 | -- | 0.307 | 10.9 | 7.37 | 26 | -- | -- |
| 75.85 | 0.406 | 10.9 | 0.904 | 0.455 | -0.896 | -- | -1.01 | 0.318 | 9.87 | 6.57 | 26 | -- | -- |
| 82.02 | 0.422 | 10.9 | 0.953 | 0.47 | -0.888 | -- | -- | 0.324 | 10.2 | 7.366 | 26 | -- | -- |
| 81.56 | 0.421 | 11 | 0.937 | -- | -1.11 | -- | -1.1 | 0.338 | -- | 6.57 | 26 | -- | -- |
| 98.77 | 0.466 | 10.9 | 0.858 | 1.42 | -- | 1.01 | -- | 0.407 | 11.5 | -- | -- | -- | -- |
| 103.11 | 0.476 | 10.9 | 0.898 | 1.42 | -- | -- | -- | 0.411 | 11.4 | -- | -- | -- | -- |
| 85.72 | 0.431 | 10.9 | 0.98 | -- | -1.17 | -- | -- | 0.308 | -- | 5.91 | 26 | -- | -- |
| 105.3 | 0.478 | 10.9 | -- | 0.477 | -0.865 | -- | -- | 0.249 | 9.73 | 5.59 | 38 | -- | -- |
| 228.74 | 0.707 | 10.9 | 0.861 | -- | -- | -- | -- | 0.396 | -- | -- | -- | -- | -- |
| 124.36 | 0.522 | 10.9 | -- | 1.41 | -- | -- | -- | 0.311 | 11.4 | -- | -- | -- | -- |
| 109.43 | 0.487 | 10.9 | -- | -- | -1.15 | -- | -- | 0.207 | -- | 5.9 | 26 | -- | -- |
| 248.27 | 0.735 | 10.9 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 5 | 67.49 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 12 |
| 7 | 67.95 | radiation | 10.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 27 | 70.14 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 28 | 70.15 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 30 | 70.35 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 48 | 71.07 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 3 |
| 49 | 71.07 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 56 | 71.26 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 63 | 71.43 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 74 | 71.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 77 | 71.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 3 |
| 79 | 71.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 86 | 71.89 | radiation | 10.0 | 90 | < th | dose independent | rect. | 2 | 12 |
| 96 | 72.04 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 103 | 72.12 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 107 | 72.20 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 109 | 72.21 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 110 | 72.22 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 118 | 72.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 120 | 72.31 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 121 | 72.31 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 124 | 72.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 125 | 72.31 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 127 | 72.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 132 | 72.31 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 133 | 72.31 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 139 | 72.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 144 | 72.36 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 146 | 72.39 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 148 | 72.40 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 155 | 72.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 21 |
| 167 | 72.56 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 169 | 72.56 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 170 | 72.56 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 173 | 72.56 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 174 | 72.56 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 176 | 72.56 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 3 |
| 180 | 72.56 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 21 |
| 200 | 72.65 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 218 | 72.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 237 | 72.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 5 |
| 238 | 72.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 243 | 72.96 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 273 | 73.08 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 307 | 73.18 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 320 | 73.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 321 | 73.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 322 | 73.27 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 324 | 73.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 14 |
| 331 | 73.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 332 | 73.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 335 | 73.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 339 | 73.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 344 | 73.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 345 | 73.32 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 346 | 73.32 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 351 | 73.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 355 | 73.33 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 357 | 73.33 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 358 | 73.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 361 | 73.33 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 362 | 73.33 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 369 | 73.34 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 372 | 73.34 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 373 | 73.34 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 379 | 73.36 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 390 | 73.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 397 | 73.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 10 |
| 399 | 73.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 10 |
| 402 | 73.53 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 408 | 73.57 | radiation | 10.0 | 10 | < th | dose independent | rect. | 2 | 13 |
| 413 | 73.61 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 21 |
| 416 | 73.61 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 440 | 73.77 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 443 | 73.78 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 498 | 73.95 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 2 | 4 |
| 501 | 73.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 506 | 73.99 | wind | 9.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 511 | 74.00 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 572 | 74.16 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 17 |
| 636 | 74.32 | radiation | 10.0 | 10 | < th | dose independent | rect. | 12 | 18 |
| 640 | 74.33 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 660 | 74.41 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 699 | 74.46 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 720 | 74.56 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 20 |
| 746 | 74.68 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 760 | 74.70 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 763 | 74.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 843 | 75.00 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 11 |
| 863 | 75.07 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 867 | 75.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 14 |
| 869 | 75.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 875 | 75.13 | temperature | 25.0 | 90 | < th | dose independent | rect. | 2 | 13 |
| 889 | 75.18 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 928 | 75.28 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 941 | 75.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 21 |