Os02g0641900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myb7 protein (Fragment).
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Os02g0641900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myb7 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.89 | 0.644 | 5.9 | 0.944 | 0.544 | 1.9 | 0.21 | 0.984 | -0.337 | 8.2 | 22.2 | 2103 | -- | -- |
| 190.04 | 0.642 | 5.86 | 1.26 | 0.548 | 1.89 | 0.322 | -- | -0.259 | 8.21 | 22.15 | 2081 | -- | -- |
| 187.67 | 0.638 | 5.9 | 0.947 | 0.544 | 1.93 | -- | 1.07 | -0.345 | 8.35 | 22.01 | 2072 | -- | -- |
| 190.35 | 0.643 | 5.86 | 1.27 | 0.547 | 1.89 | -- | -- | -0.259 | 8.31 | 22.14 | 2082 | -- | -- |
| 203.9 | 0.665 | 5.91 | 0.976 | -- | 1.99 | -- | 1.08 | -0.322 | -- | 22.05 | 2103 | -- | -- |
| 315.53 | 0.833 | 6 | 0.48 | 0.664 | -- | 0.306 | -- | -0.908 | 8.64 | -- | -- | -- | -- |
| 315.82 | 0.832 | 6 | 0.491 | 0.661 | -- | -- | -- | -0.907 | 8.73 | -- | -- | -- | -- |
| 206.56 | 0.669 | 5.87 | 1.33 | -- | 1.97 | -- | -- | -0.237 | -- | 22.02 | 2109 | -- | -- |
| 225.03 | 0.699 | 5.91 | -- | 0.6 | 1.52 | -- | -- | -0.488 | 8.42 | 22.36 | 1937 | -- | -- |
| 340.6 | 0.862 | 6.02 | 0.492 | -- | -- | -- | -- | -0.902 | -- | -- | -- | -- | -- |
| 322.17 | 0.84 | 6.01 | -- | 0.663 | -- | -- | -- | -0.962 | 8.68 | -- | -- | -- | -- |
| 243.95 | 0.727 | 5.92 | -- | -- | 1.55 | -- | -- | -0.455 | -- | 22.48 | 2112 | -- | -- |
| 346.99 | 0.869 | 6.03 | -- | -- | -- | -- | -- | -0.956 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 10 | 193.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 18 | 193.56 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 57 | 195.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 63 | 195.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 64 | 195.53 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 67 | 195.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 76 | 195.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 84 | 196.07 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 86 | 196.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 101 | 196.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 114 | 196.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 115 | 196.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 120 | 196.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 182 | 197.64 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 288 | 198.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 314 | 199.09 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 365 | 199.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 369 | 199.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 6 |
| 479 | 199.85 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 615 | 200.52 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 624 | 200.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 733 | 201.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 836 | 201.80 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 839 | 201.83 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |