Os02g0640200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0640200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.54 | 0.233 | 9.25 | 0.0969 | 0.265 | -0.835 | -0.101 | 0.114 | 0.321 | 5.89 | 27.1 | 14 | -- | -- |
| 24.56 | 0.231 | 9.25 | 0.11 | 0.267 | -0.843 | -0.0807 | -- | 0.323 | 5.82 | 27.08 | 13 | -- | -- |
| 24.56 | 0.231 | 9.25 | 0.101 | 0.264 | -0.835 | -- | 0.0894 | 0.323 | 5.92 | 27.1 | 12 | -- | -- |
| 24.57 | 0.231 | 9.25 | 0.116 | 0.264 | -0.838 | -- | -- | 0.326 | 5.92 | 27.05 | 12 | -- | -- |
| 27.38 | 0.245 | 9.25 | 0.136 | -- | -0.791 | -- | 0.00618 | 0.358 | -- | 25.09 | 15 | -- | -- |
| 34.74 | 0.276 | 9.2 | 0.317 | 0.249 | -- | 0.031 | -- | 0.511 | 9.67 | -- | -- | -- | -- |
| 34.74 | 0.276 | 9.2 | 0.318 | 0.249 | -- | -- | -- | 0.511 | 9.65 | -- | -- | -- | -- |
| 27.38 | 0.245 | 9.25 | 0.137 | -- | -0.791 | -- | -- | 0.358 | -- | 25.1 | 15 | -- | -- |
| 24.89 | 0.232 | 9.25 | -- | 0.278 | -0.888 | -- | -- | 0.307 | 5.7 | 27.14 | 15 | -- | -- |
| 38.41 | 0.29 | 9.21 | 0.316 | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
| 37.4 | 0.286 | 9.21 | -- | 0.248 | -- | -- | -- | 0.476 | 9.56 | -- | -- | -- | -- |
| 27.84 | 0.247 | 9.25 | -- | -- | -0.834 | -- | -- | 0.335 | -- | 25.1 | 15 | -- | -- |
| 41.04 | 0.299 | 9.22 | -- | -- | -- | -- | -- | 0.477 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 2 | 25.00 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 3 | 25.03 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 4 | 25.08 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 5 | 25.09 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 6 | 25.10 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 8 | 25.11 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 12 | 25.13 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 17 | 25.15 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 20 | 25.16 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 21 | 25.17 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 23 | 25.18 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 102 | 25.57 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 135 | 25.73 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 137 | 25.74 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 148 | 25.77 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 187 | 25.98 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 235 | 26.24 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 253 | 26.30 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 289 | 26.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 307 | 26.52 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 328 | 26.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 366 | 26.72 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 385 | 26.76 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 21 |
| 388 | 26.77 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 389 | 26.77 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 460 | 26.85 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 461 | 26.86 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 519 | 26.93 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 523 | 26.93 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 531 | 26.94 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 544 | 26.95 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 554 | 26.95 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 617 | 27.01 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 629 | 27.01 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 645 | 27.03 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 646 | 27.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 673 | 27.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 674 | 27.05 | temperature | 10.0 | 10 | > th | dose dependent | sin | 8 | NA |
| 675 | 27.05 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 760 | 27.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 773 | 27.12 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 812 | 27.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 815 | 27.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 825 | 27.15 | temperature | 30.0 | 10 | < th | dose dependent | sin | 8 | NA |
| 852 | 27.17 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 853 | 27.17 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 872 | 27.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 902 | 27.21 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 905 | 27.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 15 |
| 925 | 27.23 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 935 | 27.24 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 945 | 27.25 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 952 | 27.26 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |