Os02g0639100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os02g0639100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 202.14 | 0.668 | 4.25 | -1.62 | 0.752 | 0.645 | 0.0892 | 4.42 | -0.935 | 10.2 | 1000 | 10006 | -- | -- |
| 204.74 | 0.666 | 4.25 | -1.66 | 0.793 | 1.43 | -0.00644 | -- | -0.804 | 10.3 | 997.2 | 9519 | -- | -- |
| 200.32 | 0.659 | 4.27 | -1.66 | 0.75 | 0.99 | -- | 4.04 | -0.936 | 10.2 | 998.1 | 9088 | -- | -- |
| 202.58 | 0.663 | 4.29 | -1.8 | 0.741 | 1.65 | -- | -- | -0.913 | 10.2 | 997.2 | 9234 | -- | -- |
| 233.87 | 0.712 | 4.28 | -1.66 | -- | 1.04 | -- | 3.95 | -0.922 | -- | 998.1 | 9052 | -- | -- |
| 251.6 | 0.744 | 4.32 | -1.58 | 0.757 | -- | 0.0943 | -- | -1.02 | 10.3 | -- | -- | -- | -- |
| 251.63 | 0.743 | 4.32 | -1.58 | 0.757 | -- | -- | -- | -1.02 | 10.3 | -- | -- | -- | -- |
| 236.08 | 0.716 | 4.31 | -1.81 | -- | 1.7 | -- | -- | -0.914 | -- | 997.2 | 9159 | -- | -- |
| 284.88 | 0.786 | 4.25 | -- | 0.751 | 1.4 | -- | -- | -0.743 | 10.4 | 997.1 | 8993 | -- | -- |
| 286.56 | 0.791 | 4.34 | -1.59 | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
| 317.22 | 0.833 | 4.28 | -- | 0.766 | -- | -- | -- | -0.846 | 10.5 | -- | -- | -- | -- |
| 319.07 | 0.832 | 4.27 | -- | -- | 1.47 | -- | -- | -0.742 | -- | 997.2 | 8861 | -- | -- |
| 353.2 | 0.877 | 4.3 | -- | -- | -- | -- | -- | -0.848 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 185.66 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 3 | 186.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 4 | 186.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 6 | 187.42 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 8 | 188.01 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 10 | 189.10 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 13 | 190.09 | wind | 3.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 22 | 191.04 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 27 | 191.66 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 28 | 191.69 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 31 | 192.14 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 41 | 192.57 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 43 | 192.61 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 46 | 192.75 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 49 | 192.94 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 61 | 193.93 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 66 | 194.21 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 72 | 194.31 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 83 | 194.52 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 87 | 194.62 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 88 | 194.65 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 97 | 194.77 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 99 | 194.81 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 102 | 194.87 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 114 | 194.97 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 136 | 195.11 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 138 | 195.12 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 169 | 195.32 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 197 | 195.43 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 212 | 195.51 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 226 | 195.56 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 257 | 195.66 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 258 | 195.66 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 267 | 195.71 | temperature | 25.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 273 | 195.73 | temperature | 25.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 277 | 195.73 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 300 | 195.79 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 316 | 195.82 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 7 | 16 |
| 321 | 195.84 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 338 | 195.87 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 19 |
| 423 | 195.99 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 484 | 196.07 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 493 | 196.08 | temperature | 20.0 | 43200 | > th | dose dependent | no | NA | NA |
| 528 | 196.13 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 530 | 196.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 548 | 196.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 625 | 196.37 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 656 | 196.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 662 | 196.44 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 666 | 196.45 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 675 | 196.47 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 16 | 21 |
| 694 | 196.51 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 725 | 196.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 730 | 196.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 746 | 196.65 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 825 | 196.82 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 873 | 196.92 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 21 |
| 890 | 196.96 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 910 | 196.99 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 916 | 197.01 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 21 |
| 961 | 197.09 | humidity | 70.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 968 | 197.11 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 979 | 197.12 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 24 | 14 |
| 982 | 197.12 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 990 | 197.13 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |