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Os02g0638300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ferredoxin-thioredoxin reductase, variable chain (FTR-V) (Ferredoxin- thioredoxin reductase subunit A) (FTR-A).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.6 (0.0176) R2 : 0.0458
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.173 (0.037) R2dN8 : 0.0591 R2N8 : 0.0458
σ : 0.331
deviance : 50.31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.39 0.232 15.6 -0.434 0.423 -0.742 -0.153 0.732 -0.32 1.78 49.73 4187 -- --
24.94 0.233 15.6 -0.492 0.407 -0.519 -0.115 -- -0.297 1.5 50 4155 -- --
24.48 0.23 15.6 -0.43 0.423 -0.74 -- 0.706 -0.319 1.8 49.75 4180 -- --
24.8 0.232 15.6 -0.494 0.414 -0.51 -- -- -0.309 1.81 49.35 4159 -- --
34.47 0.273 15.6 -0.474 -- -0.754 -- 0.478 -0.303 -- 49.23 4544 -- --
29.38 0.254 15.6 -0.698 0.38 -- -0.227 -- -0.258 1.86 -- -- -- --
29.58 0.255 15.6 -0.691 0.38 -- -- -- -0.257 1.9 -- -- -- --
34.55 0.274 15.6 -0.501 -- -0.651 -- -- -0.292 -- 50 4589 -- --
30.11 0.256 15.6 -- 0.427 -0.658 -- -- -0.283 1.79 49 4333 -- --
38.29 0.289 15.6 -0.675 -- -- -- -- -0.248 -- -- -- -- --
42.15 0.304 15.6 -- 0.367 -- -- -- -0.18 1.85 -- -- -- --
40.06 0.295 15.6 -- -- -0.743 -- -- -0.269 -- 49.2 4444 -- --
50.31 0.331 15.6 -- -- -- -- -- -0.173 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.12 humidity 50 4320 < th dose independent rect. 15 20
2 23.25 humidity 50 4320 < th dose independent sin 11 NA
4 23.33 humidity 50 4320 < th dose independent rect. 15 2
41 23.57 atmosphere 1000 10 > th dose independent rect. 14 16
43 23.58 humidity 50 4320 < th dose dependent sin 11 NA
48 23.73 humidity 50 4320 > th dose independent sin 12 NA
51 23.76 humidity 50 4320 > th dose independent rect. 15 19
55 23.80 wind 9 14400 > th dose dependent sin 7 NA
57 23.83 wind 9 14400 > th dose independent sin 7 NA
58 23.84 humidity 50 4320 > th dose independent rect. 15 3
59 23.84 humidity 50 4320 > th dose independent rect. 15 14
62 23.85 humidity 50 4320 > th dose independent rect. 15 12
66 23.86 wind 9 14400 < th dose independent sin 7 NA
70 23.86 humidity 50 4320 > th dose independent rect. 15 10
86 23.95 wind 9 14400 > th dose independent rect. 20 18
119 24.06 wind 9 14400 < th dose independent rect. 18 20
121 24.09 wind 9 14400 > th dose dependent rect. 18 20
127 24.14 wind 1 43200 < th dose dependent rect. 2 1
135 24.18 wind 3 43200 > th dose independent rect. 2 1
146 24.22 wind 9 14400 < th dose independent rect. 3 12
149 24.23 wind 9 14400 < th dose independent rect. 1 14
163 24.29 wind 7 14400 > th dose dependent rect. 2 13
166 24.30 humidity 50 4320 < th dose dependent rect. 15 21
199 24.34 wind 9 14400 < th dose independent rect. 23 16
225 24.39 wind 9 43200 > th dose dependent rect. 12 2
265 24.46 humidity 50 4320 < th dose independent no NA NA
406 24.48 wind 9 43200 > th dose independent rect. 3 11
449 24.55 radiation 40 43200 < th dose independent rect. 10 1
450 24.55 wind 9 43200 > th dose independent rect. 11 3
484 24.61 wind 9 43200 > th dose dependent rect. 11 5
485 24.61 humidity 90 270 > th dose dependent rect. 23 6
487 24.62 radiation 40 43200 > th dose independent rect. 10 1
526 24.66 atmosphere 1000 270 > th dose independent rect. 22 8
536 24.67 wind 9 14400 > th dose dependent rect. 15 23
548 24.68 wind 5 4320 > th dose dependent rect. 2 17
569 24.72 wind 3 43200 < th dose independent rect. 2 1
572 24.72 wind 9 14400 > th dose dependent no NA NA
574 24.72 wind 9 14400 > th dose dependent rect. 1 23
575 24.72 wind 9 14400 > th dose dependent rect. 3 23
576 24.72 wind 9 14400 > th dose dependent rect. 9 23
583 24.73 wind 9 14400 > th dose dependent rect. 3 20
598 24.74 wind 1 14400 < th dose dependent rect. 9 1
600 24.74 humidity 90 90 > th dose dependent rect. 24 16
636 24.77 wind 9 43200 > th dose independent rect. 15 1
678 24.79 humidity 90 4320 > th dose dependent rect. 1 1
692 24.80 humidity 90 90 > th dose dependent rect. 24 12
700 24.80 wind 9 14400 > th dose dependent rect. 12 23
706 24.82 humidity 90 4320 > th dose independent rect. 24 2
712 24.82 wind 9 14400 < th dose independent rect. 3 21
727 24.83 wind 9 14400 < th dose independent rect. 3 19
730 24.83 wind 9 14400 > th dose independent rect. 15 23
767 24.85 humidity 60 4320 < th dose dependent rect. 16 18
782 24.86 wind 9 14400 < th dose independent rect. 15 23
805 24.88 wind 9 14400 > th dose independent rect. 1 21
806 24.88 wind 9 14400 > th dose independent rect. 3 21
816 24.89 wind 9 14400 > th dose independent no NA NA
826 24.89 atmosphere 1000 270 > th dose independent rect. 24 17
837 24.89 wind 9 14400 > th dose independent rect. 10 22
877 24.90 wind 9 14400 < th dose independent rect. 10 22
882 24.90 wind 9 14400 < th dose independent rect. 23 23
886 24.91 wind 9 14400 < th dose independent no NA NA
930 24.92 wind 9 14400 > th dose independent rect. 7 23
934 24.92 humidity 90 270 > th dose dependent rect. 1 1
964 24.94 humidity 90 4320 < th dose independent rect. 24 1
965 24.94 wind 7 4320 > th dose independent rect. 15 2