Os02g0637800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF639 family protein.
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Os02g0637800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF639 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.29 | 0.349 | 6.78 | 0.385 | 0.351 | -1.07 | -0.361 | 0.3 | 0.0288 | 7.4 | 8.899 | 10 | -- | -- |
| 55.3 | 0.346 | 6.78 | 0.389 | 0.354 | -1.13 | -0.361 | -- | 0.0297 | 7.38 | 8.9 | 10 | -- | -- |
| 55.59 | 0.347 | 6.78 | 0.37 | 0.346 | -1.05 | -- | 0.556 | 0.0264 | 7.61 | 8.706 | 11 | -- | -- |
| 55.6 | 0.347 | 6.78 | 0.369 | 0.347 | -1.2 | -- | -- | 0.0276 | 7.6 | 8.702 | 11 | -- | -- |
| 62 | 0.367 | 6.79 | 0.372 | -- | -1.09 | -- | 0.786 | 0.0297 | -- | 8.698 | 11 | -- | -- |
| 59.36 | 0.361 | 6.78 | 0.456 | 0.374 | -- | -0.58 | -- | 0.055 | 6.82 | -- | -- | -- | -- |
| 60.16 | 0.363 | 6.77 | 0.447 | 0.372 | -- | -- | -- | 0.0571 | 7.15 | -- | -- | -- | -- |
| 62.04 | 0.367 | 6.79 | 0.371 | -- | -1.28 | -- | -- | 0.0296 | -- | 8.7 | 11 | -- | -- |
| 59.13 | 0.358 | 6.78 | -- | 0.354 | -1.38 | -- | -- | 0.00343 | 7.58 | 8.7 | 11 | -- | -- |
| 67.48 | 0.384 | 6.78 | 0.454 | -- | -- | -- | -- | 0.0637 | -- | -- | -- | -- | -- |
| 65.42 | 0.378 | 6.79 | -- | 0.377 | -- | -- | -- | 0.00735 | 7.07 | -- | -- | -- | -- |
| 65.49 | 0.377 | 6.8 | -- | -- | -1.48 | -- | -- | -0.0139 | -- | 8.7 | 11 | -- | -- |
| 72.92 | 0.399 | 6.79 | -- | -- | -- | -- | -- | 0.0133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.53 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 8 | 54.04 | wind | 9.0 | 10 | > th | dose dependent | rect. | 17 | 21 |
| 12 | 54.09 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 19 | 54.13 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 24 | 54.18 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 32 | 54.21 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 44 | 54.26 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 51 | 54.30 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 55 | 54.32 | radiation | 10.0 | 720 | > th | dose independent | rect. | 6 | 1 |
| 66 | 54.36 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 87 | 54.41 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 98 | 54.45 | temperature | 20.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 149 | 54.59 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 10 |
| 152 | 54.59 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 177 | 54.65 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 183 | 54.66 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 196 | 54.68 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 200 | 54.69 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 201 | 54.69 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 5 |
| 205 | 54.70 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 206 | 54.70 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 1 | 3 |
| 210 | 54.70 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 221 | 54.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 18 |
| 249 | 54.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 288 | 54.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 296 | 54.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 298 | 54.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 317 | 54.83 | temperature | 25.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 362 | 54.87 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 363 | 54.87 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 379 | 54.88 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 427 | 54.91 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 429 | 54.91 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 473 | 54.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 497 | 54.94 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 500 | 54.94 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 513 | 54.94 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 515 | 54.95 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 539 | 54.96 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 552 | 54.97 | temperature | 25.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 560 | 54.97 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 631 | 55.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 646 | 55.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 680 | 55.03 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 8 |
| 693 | 55.04 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 713 | 55.05 | wind | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 717 | 55.05 | wind | 9.0 | 30 | > th | dose independent | rect. | 17 | 21 |
| 772 | 55.07 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 841 | 55.10 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 885 | 55.11 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 933 | 55.14 | wind | 9.0 | 10 | < th | dose independent | sin | 22 | NA |