Os02g0637700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alcohol dehydrogenase-like protein.
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Os02g0637700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alcohol dehydrogenase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.31 | 0.295 | 10.5 | -0.474 | 0.667 | 0.789 | 0.396 | 1.27 | 0.105 | 3.18 | 24.7 | 1043 | -- | -- |
| 41.15 | 0.299 | 10.5 | -0.258 | 0.668 | 0.66 | 0.24 | -- | 0.152 | 3.17 | 25.4 | 1012 | -- | -- |
| 39.79 | 0.294 | 10.5 | -0.466 | 0.668 | 0.775 | -- | 1.15 | 0.111 | 3.18 | 24.79 | 1061 | -- | -- |
| 41.28 | 0.299 | 10.5 | -0.261 | 0.668 | 0.662 | -- | -- | 0.154 | 3.14 | 25.46 | 1012 | -- | -- |
| 46.86 | 0.319 | 10.5 | -0.36 | -- | 1.13 | -- | 1.09 | 0.141 | -- | 33.69 | 138 | -- | -- |
| 47.42 | 0.323 | 10.5 | -0.451 | 0.609 | -- | 0.273 | -- | 0.0122 | 3.55 | -- | -- | -- | -- |
| 47.65 | 0.323 | 10.5 | -0.455 | 0.611 | -- | -- | -- | 0.0106 | 3.53 | -- | -- | -- | -- |
| 47.79 | 0.322 | 10.5 | -0.197 | -- | 1.2 | -- | -- | 0.184 | -- | 36.36 | 127 | -- | -- |
| 42.84 | 0.305 | 10.5 | -- | 0.676 | 0.788 | -- | -- | 0.206 | 3.09 | 25.56 | 1041 | -- | -- |
| 68.47 | 0.387 | 10.5 | -0.43 | -- | -- | -- | -- | 0.0268 | -- | -- | -- | -- | -- |
| 53.12 | 0.341 | 10.5 | -- | 0.602 | -- | -- | -- | 0.0613 | 3.53 | -- | -- | -- | -- |
| 48.75 | 0.325 | 10.5 | -- | -- | 1.26 | -- | -- | 0.212 | -- | 55.85 | 132 | -- | -- |
| 73.34 | 0.4 | 10.5 | -- | -- | -- | -- | -- | 0.0745 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 12 | 36.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 9 |
| 21 | 36.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 29 | 36.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 30 | 36.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 53 | 37.07 | temperature | 25 | 720 | > th | dose independent | rect. | 4 | 5 |
| 54 | 37.07 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 11 |
| 95 | 37.34 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 112 | 37.47 | temperature | 10 | 720 | > th | dose dependent | sin | 6 | NA |
| 258 | 38.21 | temperature | 25 | 720 | < th | dose independent | sin | 5 | NA |
| 291 | 38.30 | temperature | 25 | 720 | > th | dose independent | sin | 5 | NA |
| 345 | 38.44 | temperature | 25 | 720 | > th | dose independent | rect. | 24 | 13 |
| 528 | 39.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 539 | 39.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 767 | 39.58 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 781 | 39.63 | temperature | 25 | 90 | > th | dose independent | rect. | 3 | 16 |
| 872 | 39.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 881 | 39.83 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 916 | 39.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 923 | 39.90 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 934 | 39.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 947 | 39.93 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 952 | 39.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 955 | 39.94 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 977 | 39.97 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |