Os02g0635200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nitrilase 2 (EC 3.5.5.1).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0635200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Nitrilase 2 (EC 3.5.5.1).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.64 | 0.324 | 11.9 | -1.17 | 1.65 | -0.623 | 1.19 | -1.25 | -0.305 | 6.34 | 9.808 | 80 | -- | -- |
| 54.61 | 0.347 | 11.9 | -1.18 | 1.56 | -0.343 | 1.77 | -- | -0.269 | 7.3 | 10.44 | 60 | -- | -- |
| 50.88 | 0.332 | 11.9 | -1.16 | 1.63 | -0.597 | -- | -1.34 | -0.31 | 6.37 | 9.857 | 63 | -- | -- |
| 61.31 | 0.365 | 11.9 | -1.14 | 1.64 | -0.638 | -- | -- | -0.307 | 6.29 | 10.95 | 81 | -- | -- |
| 164.33 | 0.6 | 11.9 | -1.12 | -- | -0.782 | -- | -1.16 | -0.26 | -- | 7.878 | 32 | -- | -- |
| 57.33 | 0.355 | 11.9 | -1.19 | 1.74 | -- | 1.87 | -- | -0.266 | 8.02 | -- | -- | -- | -- |
| 67.51 | 0.385 | 11.9 | -1.14 | 1.75 | -- | -- | -- | -0.269 | 7.89 | -- | -- | -- | -- |
| 172.57 | 0.614 | 11.9 | -1.1 | -- | -0.784 | -- | -- | -0.258 | -- | 7.651 | 16 | -- | -- |
| 95.29 | 0.455 | 11.9 | -- | 1.62 | -0.65 | -- | -- | -0.18 | 6.28 | 10 | 81 | -- | -- |
| 233.68 | 0.714 | 11.9 | -1.12 | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
| 101.97 | 0.472 | 11.9 | -- | 1.74 | -- | -- | -- | -0.142 | 7.93 | -- | -- | -- | -- |
| 204.46 | 0.668 | 11.9 | -- | -- | -0.793 | -- | -- | -0.136 | -- | 7.651 | 16 | -- | -- |
| 267.01 | 0.763 | 11.9 | -- | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.48 | radiation | 1.0 | 90 | > th | dose independent | sin | 2 | NA |
| 3 | 44.27 | humidity | 80.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 5 | 44.33 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 7 | 44.35 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 15 | 44.57 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 17 | 44.59 | radiation | 1.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 32 | 44.75 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 13 |
| 52 | 44.89 | radiation | 1.0 | 90 | < th | dose independent | sin | 2 | NA |
| 58 | 44.93 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 78 | 45.23 | humidity | 90.0 | 30 | < th | dose independent | sin | 3 | NA |
| 89 | 45.34 | wind | 9.0 | 30 | < th | dose dependent | rect. | 16 | 14 |
| 94 | 45.36 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 111 | 45.54 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 113 | 45.57 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 117 | 45.64 | wind | 9.0 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 121 | 45.73 | wind | 7.0 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 127 | 45.80 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 17 |
| 131 | 45.82 | wind | 3.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 133 | 45.83 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 8 |
| 137 | 45.87 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 143 | 45.92 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 19 |
| 146 | 45.96 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 147 | 45.96 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 11 |
| 152 | 45.97 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 2 | 6 |
| 158 | 46.01 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 13 |
| 160 | 46.01 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 162 | 46.02 | wind | 7.0 | 270 | < th | dose independent | rect. | 10 | 9 |
| 173 | 46.08 | wind | 3.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 180 | 46.10 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 11 |
| 200 | 46.15 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 231 | 46.22 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 3 |
| 248 | 46.25 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 258 | 46.27 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 266 | 46.28 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 272 | 46.30 | wind | 5.0 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 298 | 46.35 | humidity | 90.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 313 | 46.39 | humidity | 90.0 | 30 | > th | dose independent | sin | 3 | NA |
| 335 | 46.43 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 14 |
| 338 | 46.44 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 353 | 46.46 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 360 | 46.49 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 374 | 46.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 393 | 46.56 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 7 |
| 419 | 46.59 | humidity | 90.0 | 30 | > th | dose independent | rect. | 3 | 5 |
| 427 | 46.61 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 12 |
| 429 | 46.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 15 |
| 453 | 46.65 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 8 |
| 461 | 46.66 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 463 | 46.66 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 473 | 46.66 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 475 | 46.67 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 14 |
| 520 | 46.73 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 3 |
| 573 | 46.79 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 575 | 46.80 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 655 | 46.87 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 17 |
| 677 | 46.90 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 683 | 46.91 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 684 | 46.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 686 | 46.91 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 688 | 46.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 693 | 46.92 | humidity | 50.0 | 30 | > th | dose independent | rect. | 14 | 16 |
| 720 | 46.95 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 734 | 46.96 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 762 | 46.99 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 779 | 47.01 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 792 | 47.02 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 801 | 47.03 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 8 |
| 805 | 47.03 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 809 | 47.03 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 813 | 47.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 819 | 47.05 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 820 | 47.05 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 822 | 47.05 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 823 | 47.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 827 | 47.05 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 829 | 47.05 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 845 | 47.05 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 19 |
| 914 | 47.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 915 | 47.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 916 | 47.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 917 | 47.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 927 | 47.15 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 20 |
| 937 | 47.16 | humidity | 80.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 940 | 47.16 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 15 |
| 941 | 47.16 | wind | 7.0 | 30 | < th | dose independent | rect. | 14 | 16 |
| 958 | 47.18 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 3 | 3 |
| 969 | 47.19 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 10 |
| 996 | 47.21 | radiation | 1.0 | 270 | < th | dose independent | sin | 6 | NA |