Os02g0633400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 61 kDa protein homolog.
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Os02g0633400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 61 kDa protein homolog.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.25 | 0.283 | 10.7 | -1.22 | 0.556 | 0.7 | -0.00386 | -2.5 | -0.418 | 17.2 | 18.3 | 2558 | -- | -- |
| 39.44 | 0.295 | 10.6 | -0.476 | 0.417 | 1.14 | -0.133 | -- | -0.242 | 20.3 | 14.8 | 1533 | -- | -- |
| 36.25 | 0.28 | 10.7 | -1.22 | 0.556 | 0.7 | -- | -2.5 | -0.418 | 17.2 | 18.3 | 2556 | -- | -- |
| 39.42 | 0.292 | 10.6 | -0.482 | 0.258 | 1.1 | -- | -- | -0.228 | 19.5 | 13.5 | 217 | -- | -- |
| 48.09 | 0.323 | 10.7 | -1.22 | -- | 0.824 | -- | -2.42 | -0.445 | -- | 19.12 | 1892 | -- | -- |
| 52.38 | 0.339 | 10.6 | -0.248 | 0.531 | -- | 0.0821 | -- | -0.08 | 17.7 | -- | -- | -- | -- |
| 52.39 | 0.339 | 10.6 | -0.248 | 0.531 | -- | -- | -- | -0.0797 | 17.8 | -- | -- | -- | -- |
| 41.58 | 0.3 | 10.6 | -0.536 | -- | 1.24 | -- | -- | -0.276 | -- | 15.36 | 348 | -- | -- |
| 44.78 | 0.313 | 10.6 | -- | 0.425 | 0.859 | -- | -- | -0.164 | 19.7 | 16.23 | 211 | -- | -- |
| 67.04 | 0.383 | 10.6 | -0.265 | -- | -- | -- | -- | -0.0923 | -- | -- | -- | -- | -- |
| 54.02 | 0.344 | 10.6 | -- | 0.535 | -- | -- | -- | -0.0521 | 17.7 | -- | -- | -- | -- |
| 48.42 | 0.324 | 10.6 | -- | -- | 0.963 | -- | -- | -0.192 | -- | 17.7 | 342 | -- | -- |
| 68.89 | 0.387 | 10.6 | -- | -- | -- | -- | -- | -0.0629 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 2 | 33.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 3 | 33.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 5 | 33.69 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 13 |
| 6 | 33.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 14 | 33.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 15 | 33.82 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 8 |
| 16 | 33.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 20 | 33.84 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 24 | 33.85 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 3 |
| 27 | 33.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 3 |
| 28 | 33.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 59 | 33.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 71 | 33.99 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 92 | 34.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 130 | 34.10 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 136 | 34.12 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 225 | 34.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 255 | 34.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 256 | 34.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 355 | 34.58 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 548 | 34.92 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 594 | 34.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 651 | 35.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 661 | 35.10 | temperature | 30 | 1440 | < th | dose dependent | sin | 10 | NA |
| 721 | 35.18 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 737 | 35.22 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 823 | 35.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 828 | 35.37 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 841 | 35.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 920 | 35.52 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |